RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, human

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGCR-213	ENST00000515776	NPHP4	O75161	1426 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TCRBV16S1A1N1	A0A5B0	115 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MAGEA13P	A6NCF6	341 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	C2orf81	A6NN90	581 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ERVV-2	B6SEH9	535 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	BTBD19	C9JJ37	291 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PSMD14	O00487	310 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MAGEB3	O15480	346 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RNF113A	O15541	343 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	FIBP	O43427	364 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NMT2	O60551	498 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PFKFB2	O60825	505 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TMCC2	O75069	709 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RNASEH2A	O75792	299 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	KRT37	O76014	449 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SEC24D	O94855	1032 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	STAMBP	O95630	424 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ASMTL	O95671	621 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	OLFM2	O95897	454 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	FAM107A	O95990	144 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	GNAI2	P04899	355 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PDHA1	P08559	390 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	IFIT2	P09913	472 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CYP2C9	P11712	490 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ACADS	P16219	412 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ATP2A2	P16615	1042 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SFPQ	P23246	707 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MAN1A1	P33908	653 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SERPINB6	P35237	376 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PTGS2	P35354	604 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PCK1	P35558	622 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	HSD17B4	P51659	736 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ARFIP2	P53365	341 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RABGGTB	P53611	331 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	IGBP1	P78318	339 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	KRT83	P78385	493 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	AKAP17A	Q02040	695 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RELA	Q04206	551 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ITGB3BP	Q13352	177 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NR1D2	Q14995	579 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TNIP1	Q15025	636 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	DGKD	Q16760	1214 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MYLK3	Q32MK0	819 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TMEM177	Q53S58	311 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TTMP	Q5BVD1	217 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TRIM61	Q5EBN2	209 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776		Q6ZNX1	250 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RASGRP2	Q7LDG7	609 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CAND1	Q86VP6	1230 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	FAM186B	Q8IYM0	893 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	AADAT	Q8N5Z0	425 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ANKRD44	Q8N8A2	993 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PPFIBP2	Q8ND30	876 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TOR1AIP2	Q8NFQ8	470 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	GPR150	Q8NGU9	434 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MAML1	Q92585	1016 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CDKL2	Q92772	493 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NKD2	Q969F2	451 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	FAM136A	Q96C01	138 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PGBD4	Q96DM1	585 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CYFIP2	Q96F07	1278 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ANKRD36BP1	Q96IX9	119 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	RBM14	Q96PK6	669 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TCF25	Q9BQ70	676 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	HEPH	Q9BQS7	1158 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SPATA16	Q9BXB7	569 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	KLHL4	Q9C0H6	718 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	DNAI2	Q9GZS0	605 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SNX25	Q9H3E2	840 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	ZSWIM4	Q9H7M6	989 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	DNAJC18	Q9H819	358 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	C12orf10	Q9HB07	376 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	IL23A	Q9NPF7	189 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SAMSN1	Q9NSI8	373 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	DDX19A	Q9NUU7	478 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	DDX56	Q9NY93	547 aa	Known RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	IL1RAPL1	Q9NZN1	696 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NDUFA13	Q9P0J0	144 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	SIRPG	Q9P1W8	387 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PDP2	Q9P2J9	529 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CRNN	Q9UBG3	495 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	MOSPD1	Q9UJG1	213 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	LZTS1	Q9Y250	596 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	PPP2R2C	Q9Y2T4	447 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NFE2L3	Q9Y4A8	694 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	TCHH	Q07283	1943 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	KIF14	Q15058	1648 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	NPHP3	Q7Z494	1330 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CFAP43	Q8NDM7	1665 aa		4.16	□□□□□ -1.74
HMGCR-213	ENST00000515776	CARMIL1	Q5VZK9	1371 aa		4.15	□□□□□ -1.74
HMGCR-213	ENST00000515776	BCL9	O00512	1426 aa		4.15	□□□□□ -1.74
HMGCR-213	ENST00000515776	PTPRK	Q15262	1439 aa		4.15	□□□□□ -1.74
HMGCR-213	ENST00000515776	KLRG2	A4D1S0	409 aa	Predicted RBP	4.15	□□□□□ -1.75
HMGCR-213	ENST00000515776	LRRC72	A6NJI9	287 aa		4.15	□□□□□ -1.75
HMGCR-213	ENST00000515776	CCT8L1P	A6NM43	557 aa		4.15	□□□□□ -1.75
HMGCR-213	ENST00000515776		E7ENQ6	273 aa		4.15	□□□□□ -1.75
HMGCR-213	ENST00000515776	GOLGA8T	H3BQL2	631 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms