RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 KCNT1Q5JUK3 1230 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-214ENST00000515035 TCP10LQ8TDR4 215 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 RORBQ92753 470 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 SAR1AQ9NR31 198 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 UBDO15205 165 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 MAP3K13O43283 966 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ANXA9O76027 345 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 PSMG1O95456 288 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 SEPHS2Q99611 448 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 CNPY3Q9BT09 278 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 CLEC4MQ9H2X3 399 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 CATSPERBQ9H7T0 1116 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 WWOXQ9NZC7 414 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 GPRC5DQ9NZD1 345 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 EIF2S1P05198 315 aaKnown RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 GZMAP12544 262 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 RRM2P31350 389 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 KRT20P35900 424 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 XRCC4Q13426 336 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ZRANB3Q5FWF4 1079 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 TRIQKQ629K1 86 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ZFP1Q6P2D0 407 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 RNF148Q8N7C7 305 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 PGM2Q96G03 612 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 HMG20AQ9NP66 347 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 EXTL3O43909 919 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 TRIM13O60858 407 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 NDUFB10O96000 172 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 MAPK10P53779 464 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 C1DQ13901 141 aaKnown RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 NDUFA5Q16718 116 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 SPATA2LQ8IUW3 424 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 USP32Q8NFA0 1604 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 OSCP1Q8WVF1 389 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 VPS33AQ96AX1 596 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 LRRC40Q9H9A6 602 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ADAM30Q9UKF2 790 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ASMTLO95671 621 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 PIK3R1P27986 724 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 VAC14Q08AM6 782 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 TWF1Q12792 350 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 DGUOKQ16854 277 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 Q4G0T1 1027 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 RNFT2Q96EX2 444 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 BDH2Q9BUT1 245 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 MMADHCQ9H3L0 296 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ZNF446Q9NWS9 450 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 ACOT9Q9Y305 439 aa13.69□□□□□ -0.22
TCOF1-214ENST00000515035 PNMA8CA0A1B0GUJ8 204 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 CETPP11597 493 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 MLNP12872 115 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 MCL1Q07820 350 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ITGADQ13349 1161 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 PDZK1Q5T2W1 519 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 CRELD2Q6UXH1 353 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ISLR2Q6UXK2 745 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 STRA8Q7Z7C7 330 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 TMEM106CQ9BVX2 250 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ME2P23368 584 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 CCT8P50990 548 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 PSMC6P62333 389 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 CUL2Q13617 745 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 EMC2Q15006 297 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 DHFR2Q86XF0 187 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ANKRD13AQ8IZ07 590 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 TSEN2Q8NCE0 465 aaKnown RBP13.68□□□□□ -0.22
TCOF1-214ENST00000515035 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 KCTD14Q9BQ13 255 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-214ENST00000515035 TRMT6Q9UJA5 497 aaKnown RBP13.68□□□□□ -0.22
TCOF1-214ENST00000515035 RNF112Q9ULX5 631 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 CHKBQ9Y259 395 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 IPPQ9Y573 584 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 SLC25A27O95847 323 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 HMBSP08397 361 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 MMP14P50281 582 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 NCALDP61601 193 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 RIPOR1Q6ZS17 1223 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 SVOPQ8N4V2 548 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
TCOF1-214ENST00000515035 ENKURQ8TC29 256 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms