RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CCDC163A0A0D9SF12 145 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 XPO1O14980 1071 aaKnown RBP24.23■■□□□ 1.47
CLDND1-230ENST00000514537 MDM4O15151 490 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 AFPP02771 609 aaKnown RBP24.23■■□□□ 1.47
CLDND1-230ENST00000514537 PAEPP09466 180 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 CCDC192P0DO97 292 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 PLA2G4AP47712 749 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 BCAT1P54687 386 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 PDE4CQ08493 712 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 GOLGA8FQ08AF8 430 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 GOLGA8DPQ0D2H9 430 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 C10orf120Q5SQS8 335 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 TMEM270Q6UE05 265 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 C12orf40Q86WS4 652 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 PPM1KQ8N3J5 372 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 CAMKK1Q8N5S9 505 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 USP33Q8TEY7 942 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 KAT5Q92993 513 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 MED15Q96RN5 788 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 PNKPQ96T60 521 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 NCDNQ9UBB6 729 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 HESX1Q9UBX0 185 aa24.23■■□□□ 1.47
CLDND1-230ENST00000514537 RNF225M0QZC1 329 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 TULP2O00295 520 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 O00370 1275 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 HOXC11O43248 304 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 TKTL1P51854 596 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 GCNT1Q02742 428 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 MESP2Q0VG99 397 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 BST2Q10589 180 aaKnown RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 SRSF5Q13243 272 aaKnown RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 SIM2Q14190 667 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 PM20D1Q6GTS8 502 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 TMEM25Q86YD3 366 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 ARHGAP18Q8N392 663 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 ACDQ96AP0 544 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 CDK5RAP1Q96SZ6 601 aaKnown RBP24.22■■□□□ 1.47
CLDND1-230ENST00000514537 SPHK2Q9NRA0 654 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 PCDHB4Q9Y5E5 795 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 ATG2BQ96BY7 2078 aa24.22■■□□□ 1.47
CLDND1-230ENST00000514537 PXNP49023 591 aaPredicted RBP24.21■■□□□ 1.47
CLDND1-230ENST00000514537 PKDCCQ504Y2 493 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 LCLAT1Q6UWP7 414 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 CLEC17AQ6ZS10 378 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 RRAGAQ7L523 313 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 ARHGEF19Q8IW93 802 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 ETFBKMTQ8IXQ9 262 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 KIAA2013Q8IYS2 634 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 MLKLQ8NB16 471 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 UBA3Q8TBC4 463 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 TFAP2BQ92481 460 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 SECISBP2LQ93073 1101 aaKnown RBP24.21■■□□□ 1.47
CLDND1-230ENST00000514537 CLSTN2Q9H4D0 955 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 LSM7Q9UK45 103 aaKnown RBP24.21■■□□□ 1.47
CLDND1-230ENST00000514537 RAB23Q9ULC3 237 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 SPTBN4Q9H254 2564 aa24.21■■□□□ 1.47
CLDND1-230ENST00000514537 ANTXRLA6NF34 631 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.2■■□□□ 1.46
CLDND1-230ENST00000514537 KAT7O95251 611 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 ZBED1O96006 694 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 APODP05090 189 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 GRIA2P42262 883 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 SEC13P55735 322 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 DMC1Q14565 340 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 PRR23BQ6ZRT6 265 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 PHTF2Q8N3S3 785 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 ULBP1Q9BZM6 244 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 ARHGEF4Q9NR80 690 aa24.2■■□□□ 1.46
CLDND1-230ENST00000514537 SETSIPP0DME0 302 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 CHRM1P11229 460 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-230ENST00000514537 YWHAGP61981 247 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLDND1-230ENST00000514537 MRPS21P82921 87 aaKnown RBP24.19■■□□□ 1.46
CLDND1-230ENST00000514537 CNGA2Q16280 664 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 LPAL2Q16609 132 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 ANO4Q32M45 955 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 C2orf27AQ580R0 203 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 BTBD8Q5XKL5 378 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 LAIR1Q6GTX8 287 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 Q6ZNB5 142 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 BHLHA9Q7RTU4 235 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 MIB1Q86YT6 1006 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 SFTPA1Q8IWL2 248 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 NAT16Q8N8M0 369 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 KCTD13Q8WZ19 329 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 HHIPQ96QV1 700 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 ZSWIM1Q9BR11 485 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 INTS2Q9H0H0 1204 aaKnown RBP24.19■■□□□ 1.46
CLDND1-230ENST00000514537 LRRC4Q9HBW1 653 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 GMEB2Q9UKD1 530 aa24.19■■□□□ 1.46
CLDND1-230ENST00000514537 TULP3O75386 442 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 STC2O76061 302 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 TNFRSF4P43489 277 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 ZNF132P52740 706 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 COG7P83436 770 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 EFEMP1Q12805 493 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 NDRG1Q92597 394 aaKnown RBP24.18■■□□□ 1.46
CLDND1-230ENST00000514537 CNOT6LQ96LI5 555 aaKnown RBP24.18■■□□□ 1.46
CLDND1-230ENST00000514537 KREMEN1Q96MU8 473 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 MARK1Q9P0L2 795 aa24.18■■□□□ 1.46
CLDND1-230ENST00000514537 DEC1Q9P2X7 70 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms