RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 AXIN1O15169 862 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 PMM2O15305 246 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 GADD45BO75293 160 aaPredicted RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 KAT7O95251 611 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 APODP05090 189 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 RARGP13631 454 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ATP5C1P36542 298 aaKnown RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 GRIA2P42262 883 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 FMO5P49326 533 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 PSEN1P49768 467 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 YWHAEP62258 255 aaKnown RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 MRPS21P82921 87 aaKnown RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ARHGAP8P85298 464 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 KDSRQ06136 332 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 RSPO4Q2I0M5 234 aaPredicted RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 HSF5Q4G112 596 aaPredicted RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ISM2Q6H9L7 571 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 CACNA2D4Q7Z3S7 1137 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 TADA2BQ86TJ2 420 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 TTC30AQ86WT1 665 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ANKRD52Q8NB46 1076 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 TSTD1Q8NFU3 115 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 LOXL4Q96JB6 756 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 UBXN6Q9BZV1 441 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ARHGEF4Q9NR80 690 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 SEMA4GQ9NTN9 838 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 CLIC5Q9NZA1 410 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 EP300Q09472 2414 aaPredicted RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 MDM4O15151 490 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 EPN2O95208 641 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 CCDC192P0DO97 292 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 TBXAS1P24557 533 aaPredicted RBP11□□□□□ -0.65
HMGXB3-205ENST00000514469 TNFRSF4P43489 277 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 KIR2DL1P43626 348 aaPredicted RBP11□□□□□ -0.65
HMGXB3-205ENST00000514469 BCAT1P54687 386 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 PUM1Q14671 1186 aaKnown RBP eCLIP11□□□□□ -0.65
HMGXB3-205ENST00000514469 CSRP2Q16527 193 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 GOLGA7BQ2TAP0 167 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 CCDC40Q4G0X9 1142 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 SGO2Q562F6 1265 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 C2orf27AQ580R0 203 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 BTBD8Q5XKL5 378 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 Q6ZNB5 142 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 KBTBD6Q86V97 674 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 PIGZQ86VD9 579 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 RASSF3Q86WH2 238 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 TMEM25Q86YD3 366 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 IL17RCQ8NAC3 791 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 NELFBQ8WX92 580 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 ZC3H10Q96K80 434 aaKnown RBP11□□□□□ -0.65
HMGXB3-205ENST00000514469 MARK1Q9P0L2 795 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 DNMT3LQ9UJW3 386 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 LSM7Q9UK45 103 aaKnown RBP11□□□□□ -0.65
HMGXB3-205ENST00000514469 TSPAN16Q9UKR8 245 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 CTNND2Q9UQB3 1225 aa11□□□□□ -0.65
HMGXB3-205ENST00000514469 DYNC1LI1Q9Y6G9 523 aaKnown RBP11□□□□□ -0.65
HMGXB3-205ENST00000514469 BICDL2A1A5D9 508 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 O00370 1275 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 XPO1O14980 1071 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 P4HA2O15460 535 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 CACNG3O60359 315 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 TULP3O75386 442 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 STC2O76061 302 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 RALAP11233 206 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 SDHBP21912 280 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 DGKEP52429 567 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 SLC8A3P57103 927 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 BST2Q10589 180 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 CRY1Q16526 586 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 ANO4Q32M45 955 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 PLK5Q496M5 336 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 PREPLQ4J6C6 727 aaPredicted RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 KLHL10Q6JEL2 608 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 PRR23CQ6ZRP0 262 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 DGLUCYQ7Z3D6 616 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 ARHGAP18Q8N392 663 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 CCDC33Q8N5R6 958 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 ALLCQ8N6M5 410 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 TERB1Q8NA31 727 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 MDGA1Q8NFP4 955 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 LMO3Q8TAP4 145 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 CNOT6LQ96LI5 555 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 DUSP15Q9H1R2 295 aaPredicted RBP10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 DEC1Q9P2X7 70 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 NUDT5Q9UKK9 219 aa10.99□□□□□ -0.65
HMGXB3-205ENST00000514469 EML5Q05BV3 1969 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 NEDD8-MDP1E9PL57 170 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 SGK1O00141 431 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TULP2O00295 520 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 BIN1O00499 593 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms