RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 HERPUD2Q9BSE4 406 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 NMUR1Q9HB89 426 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 POPDC2Q9HBU9 364 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.84
DHFR-206ENST00000513048 MRPL17Q9NRX2 175 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 COMMD8Q9NX08 183 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 RNF14Q9UBS8 474 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 NAALADL1Q9UQQ1 740 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 SCML2Q9UQR0 700 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 RWDD3Q9Y3V2 267 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 IRAK3Q9Y616 596 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 CEP290O15078 2479 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 SLC38A8A6NNN8 435 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CEP104O60308 925 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 IGLV3-25P01717 112 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 RB1P06400 928 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CA3P07451 260 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 ARSEP51690 589 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 ERVK-21P61565 698 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 ATP11AP98196 1134 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CREMQ03060 361 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 UBE3AQ05086 875 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 ITIH3Q06033 890 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CKAP4Q07065 602 aaKnown RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 EIF4EBP2Q13542 120 aaPredicted RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 MTMR3Q13615 1198 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 TAZQ16635 292 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 MGAT5BQ3V5L5 792 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 BSPRYQ5W0U4 402 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 TCEAL8Q8IYN2 117 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CEP112Q8N8E3 955 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 CMASQ8NFW8 434 aaPredicted RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 EXD1Q8NHP7 514 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 GPR152Q8TDT2 470 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 FAM172AQ8WUF8 416 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 FAM149B1Q96BN6 582 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 KLHL5Q96PQ7 755 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 SEPT5Q99719 369 aaPredicted RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 ALG13Q9NP73 1137 aaKnown RBP9.77□□□□□ -0.85
DHFR-206ENST00000513048 OSER1Q9NX31 292 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 MAFFQ9ULX9 164 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 USP18Q9UMW8 372 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 SSX2IPQ9Y2D8 614 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 YIPF1Q9Y548 306 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 ATG2AQ2TAZ0 1938 aa9.77□□□□□ -0.85
DHFR-206ENST00000513048 TCRBV7S2A1N4TA0A589 114 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 C2orf71A6NGG8 1288 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 H0YGN5 161 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 GRM6O15303 877 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 CTIFO43310 598 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 RNF8O76064 485 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 RTN3O95197 1032 aaPredicted RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 CXCL14O95715 111 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 ZDHHC11BP0C7U3 371 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 RARAP10276 462 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 HMGA1P17096 107 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 YWHAQP27348 245 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 PTPN7P35236 360 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
DHFR-206ENST00000513048 PBX2P40425 430 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 TUFMP49411 452 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 SULT1E1P49888 294 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 TERF1P54274 439 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 EMP3P54852 163 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 YWHAGP61981 247 aaKnown RBP eCLIP9.76□□□□□ -0.85
DHFR-206ENST00000513048 SIX1Q15475 284 aaPredicted RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 CDO1Q16878 200 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 DCAF6Q58WW2 860 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 DENND5BQ6ZUT9 1274 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 SLC13A5Q86YT5 568 aaPredicted RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 RCOR2Q8IZ40 523 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 SPATA4Q8NEY3 305 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 FAM71BQ8TC56 605 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 GIPC2Q8TF65 315 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 POF1BQ8WVV4 589 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 TEKT4Q8WW24 435 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 RAPGEF5Q92565 580 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 EDEM1Q92611 657 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 PGAP3Q96FM1 320 aaPredicted RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 NCAPGQ9BPX3 1015 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 UBE2OQ9C0C9 1292 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 FBXO44Q9H4M3 255 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 WDR6Q9NNW5 1121 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 NGRNQ9NPE2 291 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 KLHL11Q9NVR0 708 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 DDX56Q9NY93 547 aaKnown RBP9.76□□□□□ -0.85
DHFR-206ENST00000513048 GMIPQ9P107 970 aa9.76□□□□□ -0.85
DHFR-206ENST00000513048 PCSK1NQ9UHG2 260 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms