RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PPM1DO15297 605 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 YY2O15391 372 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 LPXNO60711 386 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 NDST3O95803 873 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 DLDP09622 509 aaKnown RBP4.89□□□□□ -1.63
HTT-210ENST00000512909 SRGNP10124 158 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 NDUFB7P17568 137 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 GATA3P23771 443 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 CHKAP35790 457 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 HTRA4P83105 476 aaPredicted RBP4.89□□□□□ -1.63
HTT-210ENST00000512909 SLC25A3Q00325 362 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 KCNAB1Q14722 419 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ZNF750Q32MQ0 723 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 HSP90AB4PQ58FF6 505 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ZNF618Q5T7W0 954 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 DENND2CQ68D51 928 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 CCDC174Q6PII3 467 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ZNF354CQ86Y25 554 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 LRRC71Q8N4P6 559 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ABHD5Q8WTS1 349 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 LRIG1Q96JA1 1093 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 VPS50Q96JG6 964 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 HERPUD2Q9BSE4 406 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 WDR11Q9BZH6 1224 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 AMBRA1Q9C0C7 1298 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 PCDHAC1Q9H158 963 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 CXorf36Q9H7Y0 433 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ZMYND8Q9ULU4 1186 aaPredicted RBP4.89□□□□□ -1.63
HTT-210ENST00000512909 AFF2P51816 1311 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 NPHP3Q7Z494 1330 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ALKQ9UM73 1620 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 ABCC11Q96J66 1382 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 YTHDC2Q9H6S0 1430 aaKnown RBP4.89□□□□□ -1.63
HTT-210ENST00000512909 KIF1BO60333 1816 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 CENPVL1A0A0U1RR11 272 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 PIP5K1BO14986 540 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 ZSCAN9O15535 394 aaPredicted RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 PLA2G6O60733 806 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ZNF202O95125 648 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ONECUT2O95948 504 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 A1BGP04217 495 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ADORA2AP29274 412 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 GATMP50440 423 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 TPTEP56180 551 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 POLE2P56282 527 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 MRPS35P82673 323 aaKnown RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 DGCR2P98153 550 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 KRT72Q14CN4 511 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ERCC6LQ2NKX8 1250 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 NBPF8Q3BBV2 869 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 VPS53Q5VIR6 699 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 KAZNQ674X7 775 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 TSHZ1Q6ZSZ6 1077 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 KCTD20Q7Z5Y7 419 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 SPRED1Q7Z699 444 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 GPR149Q86SP6 731 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 RASGRP3Q8IV61 690 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 P3H2Q8IVL5 708 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 CCDC117Q8IWD4 279 aaPredicted RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 IZUMO1Q8IYV9 350 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 SLC44A3Q8N4M1 653 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 VGLL2Q8N8G2 317 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 Q8NA96 180 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ATG16L2Q8NAA4 619 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 CACTINQ8WUQ7 758 aaKnown RBP4.88□□□□□ -1.63
HTT-210ENST00000512909 NACC2Q96BF6 587 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 Q96MF0 132 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 TTLL2Q9BWV7 592 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 SERHL2Q9H4I8 314 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 RGL1Q9NZL6 768 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 SPATA31E1Q6ZUB1 1445 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 ADGRL3Q9HAR2 1447 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 C1orf167Q5SNV9 1468 aa4.88□□□□□ -1.63
HTT-210ENST00000512909 NEXMIFQ5QGS0 1516 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 KDM5AP29375 1690 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 PIPSLA2A3N6 862 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 CCDC151A5D8V7 595 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 TMEM191CA6NGB0 347 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 QSOX1O00391 747 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 TTLL1O95922 423 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 VIPP01282 170 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 CSTBP04080 98 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 PRKCBP05771 671 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 HGFP14210 728 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 LIPAP38571 399 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 TOB1P50616 345 aaPredicted RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 BCAT1P54687 386 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ALDH18A1P54886 795 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 TAP1Q03518 808 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 NSUN2Q08J23 767 aaKnown RBP eCLIP4.87□□□□□ -1.63
HTT-210ENST00000512909 ABHD18Q0P651 414 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MPP3Q13368 585 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms