RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 NT5DC3Q86UY8 548 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 SEPT8Q92599 483 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 H7C4K7 107 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ATP6V1G2O95670 118 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 CRTAMO95727 393 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF23P17027 643 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 PRIM2P49643 509 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 RARRES1P49788 294 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 PSMC6P62333 389 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF844Q08AG5 666 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 SAMD7Q7Z3H4 446 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF606Q8WXB4 792 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 SLC5A5Q92911 643 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 KRT87PA6NCN2 255 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 SOAT1P35610 550 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
COL11A1-210ENST00000512756 AMHR2Q16671 573 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 METTL7BQ6UX53 244 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 DDHD1Q8NEL9 900 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 TMEM245Q9H330 911 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 V9GYQ6 96 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 TGFB3P10600 412 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 TMED10P49755 219 aaKnown RBP12.85□□□□□ -0.35
COL11A1-210ENST00000512756 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
COL11A1-210ENST00000512756 PLEKHM3Q6ZWE6 761 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 FAM131BQ86XD5 332 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 EMC1Q8N766 993 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 COLGALT1Q8NBJ5 622 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
COL11A1-210ENST00000512756 FAM237AA0A1B0GTK4 181 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 A0A1B0GW55 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 EGFRP00533 1210 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 SERPINE1P05121 402 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L2P0CJ85 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L3P0CJ86 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L4P0CJ87 422 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L5P0CJ88 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L6P0CJ89 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4L7P0CJ90 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 CYP2F1P24903 491 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 RPL21P46778 160 aaKnown RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 NFYCQ13952 458 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 ERMARDQ5T6L9 678 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 TDRD5Q8NAT2 981 aaKnown RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DUX4Q9UBX2 424 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 BARX2Q9UMQ3 279 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 FRMPD4Q14CM0 1322 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 F8W810 466 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 RGL2O15211 777 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 JCHAINP01591 159 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 CASP7P55210 303 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 PRKAA1Q13131 559 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 ACAP1Q15027 740 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 LRRC8DQ7L1W4 858 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 MYO1HQ8N1T3 1032 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 TATDN2Q93075 761 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 TPBGLP0DKB5 382 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 GP5P40197 560 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 EPS8L2Q9H6S3 715 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 VTI1BQ9UEU0 232 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 VANGL2Q9ULK5 521 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 SNTNA6NMZ2 147 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 GLRBP48167 497 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 KRR1Q13601 381 aaKnown RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 GRTP1Q5TC63 336 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 ILDR1Q86SU0 546 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-210ENST00000512756 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 KYQ8NBH2 561 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 SLC7A5P2Q9GIP4 190 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
COL11A1-210ENST00000512756 COPG1Q9Y678 874 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms