RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SCAPQ12770 1279 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 RCN2Q14257 317 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 NR0B2Q15466 257 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 CCDC40Q4G0X9 1142 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 PREPLQ4J6C6 727 aaPredicted RBP6.61□□□□□ -1.35
CHD1-208ENST00000512392 CRELD2Q6UXH1 353 aaPredicted RBP6.61□□□□□ -1.35
CHD1-208ENST00000512392 UNQ6494/PRO21346Q6UXR6 183 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 UBE3BQ7Z3V4 1068 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 FAM83AQ86UY5 434 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 MICU3Q86XE3 530 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 GATAD2AQ86YP4 633 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 MFSD2AQ8NA29 543 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 CNNM3Q8NE01 707 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 TNIP2Q8NFZ5 429 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 KCNE4Q8WWG9 221 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD1-208ENST00000512392 CFHR4Q92496 578 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 SLC22A18Q96BI1 424 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 TCF25Q9BQ70 676 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 RTKNQ9BST9 563 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 OSBPL6Q9BZF3 934 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 LTB4R2Q9NPC1 389 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 PNPOQ9NVS9 261 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 PSD3Q9NYI0 1048 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 UBAP1Q9NZ09 502 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 MRPL15Q9P015 296 aaKnown RBP6.61□□□□□ -1.35
CHD1-208ENST00000512392 CFAP20Q9Y6A4 193 aaKnown RBP6.61□□□□□ -1.35
CHD1-208ENST00000512392 TTC41PQ6P2S7 1318 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 IGSF1Q8N6C5 1336 aa6.61□□□□□ -1.35
CHD1-208ENST00000512392 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SLC16A6O15403 523 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 DYRK3O43781 588 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 FURINP09958 794 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ARF4P18085 180 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 TYMPP19971 482 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PGM1P36871 562 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TAGLN2P37802 199 aaKnown RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 WASP42768 502 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PAFAH1B1P43034 410 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 CAMLGP49069 296 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 FSTL1Q12841 308 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 RALGDSQ12967 914 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PDK1Q15118 436 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 KHDC1LQ5JSQ8 128 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 MBLAC2Q68D91 279 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SLC51AQ86UW1 340 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PPP1R3BQ86XI6 285 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 HID1Q8IV36 788 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 POGLUT1Q8NBL1 392 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 CPT1CQ8TCG5 803 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SCFD2Q8WU76 684 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TTYH1Q9H313 450 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 MRPL44Q9H9J2 332 aaKnown RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 GRID1Q9ULK0 1009 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TRPV2Q9Y5S1 764 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 RNF123Q5XPI4 1314 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TTC21BQ7Z4L5 1316 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 FOXO6A8MYZ6 492 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PDE8BO95263 885 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TPM3P06753 285 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 NFICP08651 508 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SUPT20HL2P0C7V6 817 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 RAB6AP20340 208 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 RPA1P27694 616 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 CAPZA2P47755 286 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ARFIP2P53365 341 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 CETN1Q12798 172 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TMEM132BQ14DG7 1078 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ADRM1Q16186 407 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 TYSND1Q2T9J0 566 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 CCDC57Q2TAC2 916 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 NHSL2Q5HYW2 709 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 GLRA4Q5JXX5 417 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ATXN7L2Q5T6C5 722 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 RAP1GAP2Q684P5 730 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 PAOXQ6QHF9 649 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 CYP20A1Q6UW02 462 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ATG9AQ7Z3C6 839 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 WDR63Q8IWG1 891 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 ULK2Q8IYT8 1036 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 MYOCDQ8IZQ8 938 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 HDDC3Q8N4P3 179 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 NEK11Q8NG66 645 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 KIF18AQ8NI77 898 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SDCCAG3Q96C92 435 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 ERP44Q9BS26 406 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
CHD1-208ENST00000512392 SEMA6CQ9H3T2 930 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SMURF2Q9HAU4 748 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms