RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 C1orf228Q6PIY5 440 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 DPH6Q7L8W6 267 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 LRRC6Q86X45 466 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 KIF2BQ8N4N8 673 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 AGAP11Q8TF27 550 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TSPAN18Q96SJ8 248 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TUBB6Q9BUF5 446 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 ETNK2Q9NVF9 386 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CNTN3Q9P232 1028 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 LNPEPQ9UIQ6 1025 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 DNAJC6O75061 913 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 KRT37O76014 449 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TPSB2P20231 275 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 RBL1P28749 1068 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 HOXA11P31270 313 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CCNG1P51959 295 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 NRLP54845 237 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 HDAC4P56524 1084 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TPSAB1Q15661 275 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 GRIK4Q16099 956 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 RAB6CQ53S08 254 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 LDLRAD1Q5T700 205 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 ALKAL1Q6UXT8 129 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 USP50Q70EL3 339 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 MOB2Q70IA6 237 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SLC26A9Q7LBE3 791 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 NLRP9Q7RTR0 991 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CAND1Q86VP6 1230 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CDKL3Q8IVW4 592 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CRYBG2Q8N1P7 616 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 MTBPQ96DY7 904 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SERAC1Q96JX3 654 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SNX27Q96L92 541 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SNRNP25Q9BV90 132 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TRIM55Q9BYV6 548 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 RAB6CQ9H0N0 254 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 NRDE2Q9H7Z3 1164 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TLE6Q9H808 572 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 POPDC2Q9HBU9 364 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 NGRNQ9NPE2 291 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 MKS1Q9NXB0 559 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SLC17A7Q9P2U7 560 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 SLC45A1Q9Y2W3 748 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 RRN3P2A6NIE6 340 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 UNCXA6NJT0 531 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 GRAP2O75791 330 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 GABBR2O75899 941 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SNRPAP09012 282 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ADORA2AP29274 412 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 RGS7P49802 495 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 CDO1Q16878 200 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 PLEKHG4Q58EX7 1191 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 GJC2Q5T442 439 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SCYL2Q6P3W7 929 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TLDC1Q6P9B6 456 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SLC27A1Q6PCB7 646 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TAB3Q8N5C8 712 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ANKRD52Q8NB46 1076 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 BEST2Q8NFU1 509 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 UTP4Q969X6 686 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ZC3H7BQ9UGR2 993 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 MTO1Q9Y2Z2 717 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TTLL3Q9Y4R7 772 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SLC15A5A6NIM6 579 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 L1CAMP32004 1257 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 PRKD1Q15139 912 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 E2F5Q15329 346 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 CTC1Q2NKJ3 1217 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 DUSP28Q4G0W2 176 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 CLNKQ7Z7G1 428 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 PSTKQ8IV42 348 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TBC1D31Q96DN5 1066 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 HSFY1Q96LI6 401 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ZMAT2Q96NC0 199 aaKnown RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ANKRD27Q96NW4 1050 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 PPP1R16BQ96T49 567 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 TSSK1BQ9BXA7 367 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 GCOM2Q9BZD3 368 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 DNAI2Q9GZS0 605 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 RCOR3Q9P2K3 495 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 ZFP69BQ9UJL9 534 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 STK38LQ9Y2H1 464 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms