RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SV2BQ7L1I2 683 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 LRRTM3Q86VH5 581 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 NT5DC4Q86YG4 428 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM71AQ8IYT1 594 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SIX6OS1Q8N1H7 587 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 BBS5Q8N3I7 341 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MB21D1Q8N884 522 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM181AQ8N9Y4 354 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFWD2Q8NHY2 731 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 IL31RAQ8NI17 732 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPS8L1Q8TE68 723 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPAS1Q99814 870 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CARD6Q9BX69 1037 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM45Q9H8W5 580 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRM3Q9HC36 420 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYOZ2Q9NPC6 264 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPATS2LQ9NUQ6 558 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 FKBP14Q9NWM8 211 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 BARHL2Q9NY43 387 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TYW5A2RUC4 315 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE15A4D2H0 777 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM247A6NEH6 219 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB14O43829 449 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRMT3O60678 531 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTNND1O60716 968 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDHD2O94830 711 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 LYPLA2O95372 231 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAVIN2O95810 425 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP2C18P33260 490 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 LIMS1P48059 325 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ME1P48163 572 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 HSD17B4P51659 736 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIF11P52732 1056 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 BPIFB4P59827 614 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTK2Q05397 1052 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYO1EQ12965 1108 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 AQP6Q13520 282 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCNIQ14094 377 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 GEN1Q17RS7 908 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPATA1Q5VX52 437 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARL6IP4Q66PJ3 421 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 NEPROQ6NW34 567 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MON1BQ7L1V2 547 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PIP4P1Q86T03 277 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE6Q86UF2 777 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDX42Q86XP3 938 aaKnown RBP eCLIP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM178BQ8IXR5 827 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMCO5AQ8N6Q1 288 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAT8LQ8N9F0 302 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC16Q8NEE8 873 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTCFLQ8NI51 663 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.74□□□□□ -2.132e-6■■■■■ 33
TRAPPC13-211ENST00000512009 JDP2Q8WYK2 163 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTFMTQ96DP5 389 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC6A18Q96N87 628 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHF12Q96QT6 1004 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC1Q99614 292 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAP1L4Q99733 375 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SELENOOQ9BVL4 669 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ENKD1Q9H0I2 346 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 OSBPL2Q9H1P3 480 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 LRMDAQ9H2I8 198 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 DHX36Q9H2U1 1008 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CENPHQ9H3R5 247 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEMA6CQ9H3T2 930 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TSPY26PQ9H489 355 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MMRN2Q9H8L6 949 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF395Q9H8N7 513 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF277Q9NRM2 450 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CWC25Q9NXE8 425 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MOCS1Q9NZB8 636 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 NFKBIL1Q9UBC1 381 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 RAPGEFL1Q9UHV5 662 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 EFR3BQ9Y2G0 817 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 RRP15Q9Y3B9 282 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEX264Q9Y6I9 313 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCN2AQ99250 2005 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRRC2AP48634 2157 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM8BA6NDV4 472 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HNRNPCL2B2RXH8 293 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GAPDHSO14556 408 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KLF11O14901 512 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHUKO15111 745 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM24O15164 1050 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GNPATO15228 680 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HNRNPCL1O60812 293 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FKTNO75072 461 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RECQL4O94761 1208 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ESRRBO95718 433 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRABP2P29373 138 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 USP11P51784 963 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CLCN2P51788 898 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LBX1P52954 281 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ITGA1P56199 1179 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPS3AP61247 264 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARID5AQ03989 594 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SREBF2Q12772 1141 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRM1Q13255 1194 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CLUL1Q15846 466 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms