RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SPEF2Q9C093 1822 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 LMO7Q8WWI1 1683 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CCDC194A0A1B0GVG4 234 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 EXOC1LA0A1B0GW35 172 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 FAM172BPA6NC97 362 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 MEI4A8MW99 385 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 GIPC1O14908 333 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 EDIL3O43854 480 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 BMP10O95393 424 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CYP2D6P10635 497 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 ITIH2P19823 946 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CCNCP24863 283 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 BCAMP50895 628 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 EPHB1P54762 984 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 GBE1Q04446 702 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CYP1B1Q16678 543 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 KLHL38Q2WGJ6 581 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 KBTBD6Q86V97 674 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 RTKN2Q8IZC4 609 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 MINDY2Q8NBR6 621 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 NEDD1Q8NHV4 660 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 KBTBD7Q8WVZ9 684 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 TP53INP1Q96A56 240 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 WNT8AQ9H1J5 351 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 TRIT1Q9H3H1 467 aaKnown RBP7.58□□□□□ -1.2
CPNE4-208ENST00000511604 SMARCAD1Q9H4L7 1026 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 SIX2Q9NPC8 291 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CNNM1Q9NRU3 951 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 CFL2Q9Y281 166 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 ALG6Q9Y672 507 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 TMEM2Q9UHN6 1383 aa7.58□□□□□ -1.2
CPNE4-208ENST00000511604 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
CPNE4-208ENST00000511604 A8MX80 341 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ARHGEF15O94989 841 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 COL6A1P12109 1028 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 GNL1P36915 607 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 AARS2Q5JTZ9 985 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF618Q5T7W0 954 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ATAD3BQ5T9A4 648 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 SLX4IPQ5VYV7 408 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 SV2BQ7L1I2 683 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 LYSMD3Q7Z3D4 306 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PRPF39Q86UA1 669 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ZBTB46Q86UZ6 589 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 TICAM1Q8IUC6 712 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CCDC28AQ8IWP9 274 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 EFCAB3Q8N7B9 438 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 BBOF1Q8ND07 529 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CATSPER1Q8NEC5 780 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 RFFLQ8WZ73 363 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 SGCDQ92629 289 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ZUFSPQ96AP4 578 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 WRNIP1Q96S55 665 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 DOK1Q99704 481 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 INO80BQ9C086 356 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 NEK6Q9HC98 313 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 GDAP2Q9NXN4 497 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PPARGC1AQ9UBK2 798 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PSMD13Q9UNM6 376 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CCDC88AQ3V6T2 1871 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 C1orf232A0A0U1RR37 186 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 FAM237BA0A1B0GVD1 139 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 H3BNH8 94 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 NUAK1O60285 661 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 GGPS1O95749 300 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 DLATP10515 647 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 KRT5P13647 590 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PHKG2P15735 406 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CFL1P23528 166 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 IVDP26440 423 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 POLR2BP30876 1174 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 HADHAP40939 763 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 MAGEA4P43358 317 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CASP4P49662 377 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ITGA8P53708 1063 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 SLC25A3Q00325 362 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 FKBP3Q00688 224 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 COASYQ13057 564 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PPP6R3Q5H9R7 873 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 UBE2UQ5VVX9 321 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PGM2L1Q6PCE3 622 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CCBE1Q6UXH8 406 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CENPUQ71F23 418 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 HEATR3Q7Z4Q2 680 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 TDRPQ86YL5 185 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 CHERPQ8IWX8 916 aaKnown RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF34Q8IZ26 560 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 DEPDC4Q8N2C3 294 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF420Q8TAQ5 688 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-208ENST00000511604 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
CPNE4-208ENST00000511604 PMEPA1Q969W9 287 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms