RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 KRTAP3-3Q9BYR6 98 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KRTAP3-2Q9BYR7 98 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 UBXN6Q9BZV1 441 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ZCCHC2Q9C0B9 1178 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 NIF3L1Q9GZT8 377 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TMX1Q9H3N1 280 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ST6GALNAC4Q9H4F1 302 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 PRMT8Q9NR22 394 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 INTS13Q9NVM9 706 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MARCH2Q9P0N8 246 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ABI3Q9P2A4 366 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ARMCX3Q9UH62 379 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MOSPD1Q9UJG1 213 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 COL4A6Q14031 1691 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 FAM186AA6NE01 2351 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 IGLV3-22A0A075B6J6 115 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3DA0A087WVF3 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3IA0A087WXS9 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3EA0A087X179 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3KA0A087X1G2 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SYCE3A1L190 88 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3FA6NER0 549 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3LB9A6J9 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CYTH3O43739 400 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TLR5O60602 858 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3HP0C7X1 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PYGMP11217 842 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PIM1P11309 404 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 VDRP11473 427 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CEBPBP17676 345 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PTPN1P18031 435 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PLCG1P19174 1290 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ERCC5P28715 1186 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 GCKP35557 465 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 LTBRP36941 435 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 HSPA9P38646 679 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MTIF2P46199 727 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 EPHB1P54762 984 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 HNRNPH2P55795 449 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 NLRP12P59046 1061 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SKP1P63208 163 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 RACK1P63244 317 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 IRX6P78412 446 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SLC7A9P82251 487 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 RBPJQ06330 500 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ELOCQ15369 112 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 AMHR2Q16671 573 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 KRT39Q6A163 491 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3GQ6DHY5 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3CQ6IPX1 549 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 FBXL19Q6PCT2 694 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 LILRA6Q6PI73 481 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TRIM72Q6ZMU5 477 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ZDHHC17Q8IUH5 632 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MFN1Q8IWA4 741 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MAP7D3Q8IWC1 876 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 FAM186BQ8IYM0 893 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D3Q8IZP1 549 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TBC1D19Q8N5T2 526 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 OR2T34Q8NGX1 318 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 RPLP0P6Q8NHW5 317 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ASAP3Q8TDY4 903 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CXorf40AQ8TE69 158 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 FGF11Q92914 225 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 POM121Q96HA1 1249 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 INTS4Q96HW7 963 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 LRIG1Q96JA1 1093 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ZC3H10Q96K80 434 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TEFMQ96QE5 360 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SPAG5Q96R06 1193 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 FAM83CQ9BQN1 747 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 LSM14BQ9BX40 385 aaKnown RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 DPH1Q9BZG8 443 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ZCWPW1Q9H0M4 648 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MUC3BQ9H195 1237 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CATSPERBQ9H7T0 1116 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 VPS37BQ9H9H4 285 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PLCB1Q9NQ66 1216 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ST7Q9NRC1 585 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CPQQ9Y646 472 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MUC6Q6W4X9 2439 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SCN10AQ9Y5Y9 1956 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MYH15Q9Y2K3 1946 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PTPRJQ12913 1337 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 LACTBL1A8MY62 500 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 J3QKU1 62 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 M0QZQ0 153 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 TRIM38O00635 465 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 MAPK13O15264 365 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ALOX15BO15296 676 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 GADD45BO75293 160 aaPredicted RBP2.97□□□□□ -1.93
CLOCK-209ENST00000511124 RNF8O76064 485 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 CNTN5O94779 1100 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 NOL4O94818 638 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ABLIM3O94929 683 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SLITRK3O94933 977 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 SEMA4FO95754 770 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 IGSF6O95976 241 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 PIGRP01833 764 aa2.97□□□□□ -1.93
CLOCK-209ENST00000511124 ITGB3P05106 788 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms