RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 CKMP06732 381 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 MMEP08473 750 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 FERP16591 822 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 CHRNB2P17787 502 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 CTHP32929 405 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 RGS7P49802 495 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 MRE11P49959 708 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 SLC8A3P57103 927 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 ZBED6P86452 979 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 GOLGA8FQ08AF8 430 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 GOLGA8DPQ0D2H9 430 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 USP4Q13107 963 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF77Q15935 545 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 MEA1Q16626 185 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 SFMBT2Q5VUG0 894 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 CSGALNACT1Q8TDX6 532 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 SLC35F5Q8WV83 523 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 FAM3CQ92520 227 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 CLDN23Q96B33 292 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 FAM83CQ9BQN1 747 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 OSBPL6Q9BZF3 934 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 EBF3Q9H4W6 596 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 PNPLA8Q9NP80 782 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 SPECC1L-ADORA2AF8WAN1 911 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 GABBR2O75899 941 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 RTN3O95197 1032 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 USP17L7P0C7H9 530 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 KRT9P35527 623 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 GPD2P43304 727 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 FMO1Q01740 532 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 CDR2Q01850 454 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 TRIM14Q14142 442 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF268Q14587 947 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 MTF1Q14872 753 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 C1orf210Q8IVY1 113 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 WDTC1Q8N5D0 677 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 SH3RF2Q8TEC5 729 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 FBXO32Q969P5 355 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 KIF9Q9HAQ2 790 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 IL37Q9NZH6 218 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 TRPM5Q9NZQ8 1165 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 LUC7L2Q9Y383 392 aaKnown RBP16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 WNT6Q9Y6F9 365 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
SH3TC1-220ENST00000511002 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.21
SH3TC1-220ENST00000511002 PIK3R2O00459 728 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 MAN2B1O00754 1011 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 SCAMP3O14828 347 aaKnown RBP16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 ADCY5O95622 1261 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 OLFM2O95897 454 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 ABL1P00519 1130 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 OAS1P00973 400 aaKnown RBP16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 CHRNB1P11230 501 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 HDCP19113 662 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 YWHAQP27348 245 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 KIF11P52732 1056 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 ADIGQ0VDE8 80 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 TBX2Q13207 712 aaPredicted RBP16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 PDCLQ13371 301 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 RAB41Q5JT25 222 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 ZNF677Q86XU0 584 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 GMIPQ9P107 970 aa16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 CHORDC1Q9UHD1 332 aaPredicted RBP16.33■□□□□ 0.2
SH3TC1-220ENST00000511002 FAM92AA1XBS5 289 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 MFAP3LO75121 409 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 SKILP12757 684 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 PRKCIP41743 596 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 TKTL1P51854 596 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 GAS6Q14393 721 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 PON2Q15165 354 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 ITPRIPL2Q3MIP1 535 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 KCTD13Q8WZ19 329 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 PCDHB18PQ96TA0 734 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 NELL2Q99435 816 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 SYT11Q9BT88 431 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 ULBP1Q9BZM6 244 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 LHX5Q9H2C1 402 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 LINC00597Q9H2U6 94 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 C8orf33Q9H7E9 229 aaPredicted RBP16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms