RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 MLF2Q15773 248 aaPredicted RBP21.16■□□□□ 0.98
HOXC6-204ENST00000509328 TAF3Q5VWG9 929 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 BSPRYQ5W0U4 402 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 FMNL3Q8IVF7 1028 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 SCUBE3Q8IX30 993 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 TMEM35BQ8NCS4 154 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 C1orf131Q8NDD1 294 aaKnown RBP21.16■□□□□ 0.98
HOXC6-204ENST00000509328 PBXIP1Q96AQ6 731 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 ZFRQ96KR1 1074 aaKnown RBP21.16■□□□□ 0.98
HOXC6-204ENST00000509328 EDEM3Q9BZQ6 932 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 MIS12Q9H081 205 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 CFAP97Q9P2B7 532 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 NOCTQ9UK39 431 aaKnown RBP21.16■□□□□ 0.98
HOXC6-204ENST00000509328 NUDT5Q9UKK9 219 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 PRR33A8MZF0 331 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 E5RJQ4 531 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 TPM3P06753 285 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 CDH5P33151 784 aaPredicted RBP21.15■□□□□ 0.98
HOXC6-204ENST00000509328 PBX1P40424 430 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 SNX16P57768 344 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 PRKCQQ04759 706 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 RSRC2Q7L4I2 434 aaKnown RBP21.15■□□□□ 0.98
HOXC6-204ENST00000509328 CLEC4CQ8WTT0 213 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 OSCP1Q8WVF1 389 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 BAP1Q92560 729 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 GOLGA1Q92805 767 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 SHDQ96IW2 340 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 PPP1R13BQ96KQ4 1090 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 CPXM1Q96SM3 734 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 NUP58Q9BVL2 599 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 KLF16Q9BXK1 252 aaPredicted RBP21.15■□□□□ 0.98
HOXC6-204ENST00000509328 MFSD1Q9H3U5 465 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 HEBP1Q9NRV9 189 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 ABCC13Q9NSE7 274 aa21.15■□□□□ 0.98
HOXC6-204ENST00000509328 OLA1Q9NTK5 396 aaKnown RBP21.15■□□□□ 0.98
HOXC6-204ENST00000509328 DUS2Q9NX74 493 aaKnown RBP21.15■□□□□ 0.98
HOXC6-204ENST00000509328 E2F8A0AVK6 867 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 LSM8O95777 96 aaKnown RBP21.14■□□□□ 0.97
HOXC6-204ENST00000509328 LTFP02788 710 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 MMEP08473 750 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 CCDC172P0C7W6 258 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 FERP16591 822 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 IFNAR2P48551 515 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 MLLT6P55198 1093 aaPredicted RBP21.14■□□□□ 0.97
HOXC6-204ENST00000509328 CDR2Q01850 454 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 GOLGA8FQ08AF8 430 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 GOLGA8DPQ0D2H9 430 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 FIGNQ5HY92 759 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 IER5LQ5T953 404 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 RNF139Q8WU17 664 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 SLC20A1Q8WUM9 679 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 XPO4Q9C0E2 1151 aaKnown RBP21.14■□□□□ 0.97
HOXC6-204ENST00000509328 SH3BP1Q9Y3L3 701 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 MIA3Q5JRA6 1907 aa21.14■□□□□ 0.97
HOXC6-204ENST00000509328 SLC9A3R1O14745 358 aaPredicted RBP21.13■□□□□ 0.97
HOXC6-204ENST00000509328 MDM4O15151 490 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 PAPSS1O43252 624 aaPredicted RBP21.13■□□□□ 0.97
HOXC6-204ENST00000509328 CBFA2T2O43439 604 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 PDGFBP01127 241 aaPredicted RBP21.13■□□□□ 0.97
HOXC6-204ENST00000509328 GLULP15104 373 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 STARD6P59095 220 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 ARID5AQ03989 594 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 TNK2Q07912 1038 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 EFEMP1Q12805 493 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 ITPRIPL2Q3MIP1 535 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 HFE2Q6ZVN8 426 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 IPO4Q8TEX9 1081 aaKnown RBP21.13■□□□□ 0.97
HOXC6-204ENST00000509328 EDEM1Q92611 657 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 TTYH3Q9C0H2 523 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 EBF3Q9H4W6 596 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 HPS4Q9NQG7 708 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 GTSE1Q9NYZ3 720 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 RASAL2Q9UJF2 1139 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 STRIP2Q9ULQ0 834 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 WNT6Q9Y6F9 365 aa21.13■□□□□ 0.97
HOXC6-204ENST00000509328 CHRNB2P17787 502 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 KPNA1P52294 538 aaPredicted RBP21.12■□□□□ 0.97
HOXC6-204ENST00000509328 FMO1Q01740 532 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 RUNX3Q13761 415 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 EML3Q32P44 896 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TRIM68Q6AZZ1 485 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TPRG1Q6ZUI0 275 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 MIB1Q86YT6 1006 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 ATP2A3Q93084 1043 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 IQCDQ96DY2 449 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 MSANTD3Q96H12 275 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 LRFN3Q9BTN0 628 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TRIM62Q9BVG3 475 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 SYNCQ9H7C4 482 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 C8orf33Q9H7E9 229 aaPredicted RBP21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TBC1D17Q9HA65 648 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 MARCH2Q9P0N8 246 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TBC1D14Q9P2M4 693 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 TJP2Q9UDY2 1190 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 PIAS3Q9Y6X2 628 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 COL4A3Q01955 1670 aa21.12■□□□□ 0.97
HOXC6-204ENST00000509328 LRRC53A6NM62 1247 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 IRF1P10914 325 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 ARSAP15289 507 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 COG7P83436 770 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms