RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TROAPQ12815 778 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 HSP90AB2PQ58FF8 381 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 TAF7LQ5H9L4 462 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 GORABQ5T7V8 394 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 DBF4BQ8NFT6 615 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 SCNM1Q9BWG6 230 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 CDT1Q9H211 546 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 CAAP1Q9H8G2 361 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 MSRB1Q9NZV6 116 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 SNX14Q9Y5W7 946 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 DENND3A2RUS2 1198 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 BTBD18B2RXH4 712 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 F8W810 466 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 CLIC1O00299 241 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 TMPRSS11DO60235 418 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 VNN1O95497 513 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PLAUP00749 431 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 S100BP04271 92 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PDGFRBP09619 1106 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 HOXA11P31270 313 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-204ENST00000509268 DGKEP52429 567 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 POU5F1BQ06416 359 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 SLC14A1Q13336 389 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 IZUMO4Q1ZYL8 232 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 EMC10Q5UCC4 262 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 UBE2Q2Q8WVN8 375 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PMM1Q92871 262 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 CTHRC1Q96CG8 243 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 TRMT61AQ96FX7 289 aaKnown RBP2.65□□□□□ -1.99
XRCC4-204ENST00000509268 C17orf80Q9BSJ5 609 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 SEZ6LQ9BYH1 1024 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 MGAT4CQ9UBM8 478 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 FEZ2Q9UHY8 353 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PRKAB1Q9Y478 270 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PCDHA3Q9Y5H8 950 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 FER1L4A9Z1Z3 1794 aa2.65□□□□□ -1.99
XRCC4-204ENST00000509268 PRPF4O43172 522 aaKnown RBP eCLIP2.64□□□□□ -1.99
XRCC4-204ENST00000509268 SPRY2O43597 315 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 SLC12A2P55011 1212 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 TBX4P57082 545 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 MLC1Q15049 377 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 CCDC6Q16204 474 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 SPSB3Q6PJ21 355 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 TRILQ7L0X0 811 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 DAAM2Q86T65 1068 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 SKAP1Q86WV1 359 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 FMNL3Q8IVF7 1028 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 MORC4Q8TE76 937 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 JDP2Q8WYK2 163 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 FAM167AQ96KS9 214 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 XPR1Q9UBH6 696 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 ANAPC4Q9UJX5 808 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 THRAP3Q9Y2W1 955 aaKnown RBP2.64□□□□□ -1.99
XRCC4-204ENST00000509268 PCDHAC2Q9Y5I4 1007 aa2.64□□□□□ -1.99
XRCC4-204ENST00000509268 KIF26BQ2KJY2 2108 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 TRBV5-3A0A0A0MS03 114 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 ANTXRLA6NF34 631 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 GRPP07492 148 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 CREB1P16220 341 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 KCNA3P22001 575 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 GYS2P54840 703 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 WNT3P56703 355 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 KIF23Q02241 960 aaPredicted RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 MFSD13AQ14CX5 517 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 MGAT5BQ3V5L5 792 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 INO80DQ53TQ3 878 aaPredicted RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 ODR4Q5SWX8 454 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 HEATR3Q7Z4Q2 680 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 TICAM2Q86XR7 235 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 SPATS2Q86XZ4 545 aaKnown RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 RAVER1Q8IY67 606 aaKnown RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 CCDC146Q8IYE0 955 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 AFAP1L2Q8N4X5 818 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 UBR7Q8N806 425 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 C12orf76Q8N812 135 aaPredicted RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 NGDNQ8NEJ9 315 aaKnown RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 MSI2Q96DH6 328 aaKnown RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 INPP4AQ96PE3 977 aaPredicted RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 PAPOLBQ9NRJ5 636 aaKnown RBP2.63□□□□□ -1.99
XRCC4-204ENST00000509268 LPAR3Q9UBY5 353 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 ABCF2Q9UG63 623 aa2.63□□□□□ -1.99
XRCC4-204ENST00000509268 KLHL33A6NCF5 533 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 LRRC14BA6NHZ5 514 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 GPR39O43194 453 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 ATG13O75143 517 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 UNC5CO95185 931 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 AHSGP02765 367 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 VIL1P09327 827 aaKnown RBP2.62□□□□□ -1.99
XRCC4-204ENST00000509268 GM2AP17900 193 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 HOXC13P31276 330 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 MASP1P48740 699 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 NOVP48745 357 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 HK3P52790 923 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 ACAP2Q15057 778 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 SHBQ15464 509 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 ADAM5Q6NVV9 412 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 PPP1R3BQ86XI6 285 aa2.62□□□□□ -1.99
XRCC4-204ENST00000509268 LPAR1Q92633 364 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms