RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RTN4RL1Q86UN2 441 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ECHDC2Q86YB7 292 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 POU5F2Q8N7G0 328 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 POMGNT1Q8WZA1 660 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 P2RX5Q93086 422 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 EXOC2Q96KP1 924 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ACAP3Q96P50 834 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TARS2Q9BW92 718 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 MRPL9Q9BYD2 267 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 NAT10Q9H0A0 1025 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TMEFF2Q9UIK5 374 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 AGO2Q9UKV8 859 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 PCDHB2Q9Y5E7 798 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC4A7Q9Y6M7 1214 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRIP11Q15643 1979 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRIOBPQ9H2D6 2365 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRBV23-1A0A0A0MS06 115 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF233A6NK53 670 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CETN3O15182 167 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 TGFB1I1O43294 461 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 XPOTO43592 962 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 EXTL3O43909 919 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 MGEA5O60502 916 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GJB5O95377 273 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 NPTXRO95502 500 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GNA14O95837 355 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 PABPC1P11940 636 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 PAX3P23760 479 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HOXD13P35453 343 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GFRA1P56159 465 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 PAK1Q13153 545 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADAM9Q13443 819 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRSS53Q2L4Q9 553 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZCWPW2Q504Y3 356 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 XKR4Q5GH76 650 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 UBXN11Q5T124 520 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 DENND5AQ6IQ26 1287 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GLB1LQ6UWU2 654 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 OTOP2Q7RTS6 562 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 FILIP1Q7Z7B0 1213 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 SCUBE1Q8IWY4 988 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 NELFCDQ8IXH7 590 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZC3H3Q8IXZ2 948 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CMTR2Q8IYT2 770 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 TDHQ8IZJ6 230 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GPD1LQ8N335 351 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 NAT16Q8N8M0 369 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 XXYLT1Q8NBI6 393 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 NOC3LQ8WTT2 800 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HPS3Q969F9 1004 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CPB2Q96IY4 423 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RAD9AQ99638 391 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 BPIFA3Q9BQP9 254 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 DHRS4Q9BTZ2 278 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 MSTO1Q9BUK6 570 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 EIF2AQ9BY44 585 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 FGFBP2Q9BYJ0 223 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 TMEM117Q9H0C3 514 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CDT1Q9H211 546 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRO3102Q9H379 93 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ASB7Q9H672 318 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RPF1Q9H9Y2 349 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 AGPAT3Q9NRZ7 376 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 DMAC2Q9NW81 257 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HSPBP1Q9NZL4 362 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLEC1BQ9P126 229 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKFY1Q9P2R3 1169 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 STK39Q9UEW8 545 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RWDD2AQ9UIY3 292 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 ACSL6Q9UKU0 697 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 FRMD4BQ9Y2L6 1034 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 GDAQ9Y2T3 454 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 DERAQ9Y315 318 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 MRPS23Q9Y3D9 190 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 IPPQ9Y573 584 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 INSL6Q9Y581 213 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 BACE2Q9Y5Z0 518 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 HCFC2Q9Y5Z7 792 aa5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 TDRD15B5MCY1 1934 aaKnown RBP5.93□□□□□ -1.46
HMGB1P44-201ENST00000508597 RALGAPA2Q2PPJ7 1873 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 FNDC1Q4ZHG4 1894 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 COL4A6Q14031 1691 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SMTNL1A8MU46 457 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKRD63C9JTQ0 380 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC16A3O15427 465 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM189A1O60320 539 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 EXOC3O60645 756 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 DGKIO75912 1065 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 IL18RAPO95256 599 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 NR3C1P04150 777 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 EDN1P05305 212 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 THBDP07204 575 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 KCNE1P15382 129 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms