RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ADCY9O60503 1353 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ABCA3Q99758 1704 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 WIPF3A6NGB9 483 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 MANSC4A6NHS7 340 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC69A6NI79 296 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 SRRM3A6NNA2 597 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 BECN2A8MW95 431 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 MAP2K7O14733 419 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 COQ9O75208 318 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 HMMRO75330 724 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC43A1O75387 559 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 TRIM27P14373 513 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 WT1P19544 449 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 C5AR1P21730 350 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 GPTP24298 496 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 IARSP41252 1262 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 EXOSC10Q01780 885 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 IL10RAQ13651 578 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 ACAP2Q15057 778 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 STX1AQ16623 288 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 C16orf71Q8IYS4 520 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 CFAP52Q8N1V2 620 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 PRPF38AQ8NAV1 312 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 PDPRQ8NCN5 879 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC17A8Q8NDX2 589 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 NGDNQ8NEJ9 315 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC26Q8TAB7 109 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 DDB2Q92466 427 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 P3H4Q92791 437 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 PGBD1Q96JS3 809 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 CRACR2AQ9BSW2 395 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 MOV10L1Q9BXT6 1211 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 MCM8Q9UJA3 840 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 ODF2LQ9ULJ1 636 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 OVOS2A0A0G2JMS6 1433 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 OVOS2A0A0J9YW53 1432 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 TNS2Q63HR2 1409 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 OVOS2Q6IE36 1432 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 PPIP5K1Q6PFW1 1433 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 SBNO2Q9Y2G9 1366 aa5.03□□□□□ -1.6
PDLIM5-211ENST00000508531 NEXMIFQ5QGS0 1516 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 RPGRIP1LQ68CZ1 1315 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 TTC21BQ7Z4L5 1316 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ADGRF5Q8IZF2 1346 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 AK9Q5TCS8 1911 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 LINC00473A8K010 186 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 LIN7AO14910 233 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 STX6O43752 255 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 SNUPNO95149 360 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 LUC7L3O95232 432 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 MT-CO1P00395 513 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 HNRNPH1P31943 449 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 SLC16A1P53985 500 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 EVCP57679 992 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 GRIK3Q13003 919 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ZRSR2Q15696 482 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 C3orf36Q3SXR2 165 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 WLSQ5T9L3 541 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ATL3Q6DD88 541 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 GADL1Q6ZQY3 521 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 IQCA1Q86XH1 822 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 RPAP2Q8IXW5 612 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 CEP57L1Q8IYX8 460 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 B3GALNT2Q8NCR0 500 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 C1orf162Q8NEQ5 155 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 AFAP1L1Q8TED9 768 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 RUBCNQ92622 972 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 DPF1Q92782 380 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 N4BP2L2Q92802 583 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 KAT5Q92993 513 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ZBTB9Q96C00 473 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 HOOK2Q96ED9 719 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 SAAL1Q96ER3 474 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 RPGRIP1Q96KN7 1286 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 FUT8Q9BYC5 575 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 API5Q9BZZ5 524 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ACTR5Q9H9F9 607 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ATP6V0A4Q9HBG4 840 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 PDRG1Q9NUG6 133 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 ANO10Q9NW15 660 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 MKS1Q9NXB0 559 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 TFCP2L1Q9NZI6 479 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 VPS18Q9P253 973 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 LCMT1Q9UIC8 334 aa5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 THRAP3Q9Y2W1 955 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-211ENST00000508531 NRXN1Q9ULB1 1477 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 VWC2LB2RUY7 222 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 SGTAO43765 313 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 KINO60870 393 aaKnown RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 PECAM1P16284 738 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 ZNF81P51508 661 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 TLE1Q04724 770 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 PIGFQ07326 219 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 G3BP1Q13283 466 aaKnown RBP eCLIP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 RAB39AQ14964 217 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CDC37Q16543 378 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CEP85LQ5SZL2 805 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms