RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ACOX2Q99424 681 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CBWD1Q9BRT8 395 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 DPEP3Q9H4B8 488 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CCSER2Q9H7U1 834 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 PRDM16Q9HAZ2 1276 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 DNAJC17Q9NVM6 304 aaKnown RBP6.13□□□□□ -1.43
GYPB-208ENST00000507009 GDAP2Q9NXN4 497 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 DEC1Q9P2X7 70 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CHORDC1Q9UHD1 332 aaPredicted RBP6.13□□□□□ -1.43
GYPB-208ENST00000507009 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CDH9Q9ULB4 789 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 APOBEC2Q9Y235 224 aaKnown RBP6.13□□□□□ -1.43
GYPB-208ENST00000507009 KIF3AQ9Y496 699 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 STYXL1Q9Y6J8 313 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 PTPRJQ12913 1337 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 PCDH15Q96QU1 1955 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 GON4LQ3T8J9 2241 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 CACNA1EQ15878 2313 aa6.13□□□□□ -1.43
GYPB-208ENST00000507009 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 A8MXQ7 604 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 UPK3BL1B0FP48 263 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 UPK3BL2E5RIL1 263 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 NEDD8-MDP1E9PL57 170 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GABRDO14764 452 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 COCHO43405 550 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 LDHAP00338 332 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 OAS1P00973 400 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 PRB1P04280 392 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 DLATP10515 647 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 GNSP15586 552 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 TCF3P15923 654 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 YWHAQP27348 245 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GJB2P29033 226 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 NTSR1P30989 418 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GNL1P36915 607 aaPredicted RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 FASNP49327 2511 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 MMP16P51512 607 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 TNNC1P63316 161 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 SLC7A9P82251 487 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GRIK2Q13002 908 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 MAPRE1Q15691 268 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 HSF5Q4G112 596 aaPredicted RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 SPDYCQ5MJ68 293 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 SYCP2LQ5T4T6 812 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GRAMD4Q6IC98 578 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 FAM171BQ6P995 826 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 USP49Q70CQ1 688 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 RABEPKQ7Z6M1 372 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
GYPB-208ENST00000507009 ZCCHC9Q8N567 271 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 TERB1Q8NA31 727 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 IPO4Q8TEX9 1081 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 SCFD1Q8WVM8 642 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 SNX19Q92543 992 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 WBP2Q969T9 261 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 JAKMIP2Q96AA8 810 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 HVCN1Q96D96 273 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 CRELD1Q96HD1 420 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 EPSTI1Q96J88 318 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 AK8Q96MA6 479 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 USB1Q9BQ65 265 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 MRPL45Q9BRJ2 306 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 FGFBP2Q9BYJ0 223 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 PANK2Q9BZ23 570 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 TRIM9Q9C026 710 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 ZNF518BQ9C0D4 1074 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 IL21RQ9HBE5 538 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 SPHK2Q9NRA0 654 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 EHD2Q9NZN4 543 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 GMIPQ9P107 970 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 TBC1D14Q9P2M4 693 aa6.12□□□□□ -1.43
GYPB-208ENST00000507009 NXF1Q9UBU9 619 aaKnown RBP6.12□□□□□ -1.43
GYPB-208ENST00000507009 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 MYO18AQ92614 2054 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 PLXNB3Q9ULL4 1909 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 A0A1W2PQD8 194 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 A0A1W2PQF6 199 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 E2F8A0AVK6 867 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 FAM149AA5PLN7 773 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ZNF233A6NK53 670 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 WASH3PC4AMC7 463 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ZNF217O75362 1048 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 NEFLP07196 543 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 GAP43P17677 238 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PTPN1P18031 435 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 GARTP22102 1010 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 WARSP23381 471 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 HOXD12P35452 270 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 EIF2DP41214 584 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 PPP3CCP48454 512 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 NOP14P78316 857 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 CEBPZQ03701 1054 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 CYP4F3Q08477 520 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ORC1Q13415 861 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 HNRNPDQ14103 355 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 SF3A1Q15459 793 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms