RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SESN3P58005 492 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 TNFAIP2Q03169 654 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 SLC18A2Q05940 514 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 GOLGA7BQ2TAP0 167 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 KHDC1Q4VXA5 237 aaKnown RBP7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 BOLA3Q53S33 107 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 CCDC62Q6P9F0 684 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 LCLAT1Q6UWP7 414 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 APBB1IPQ7Z5R6 666 aaPredicted RBP7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 TTC7BQ86TV6 843 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 PQLC3Q8N755 202 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 MAB21L3Q8N8X9 362 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 PCDH19Q8TAB3 1148 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 NLRP7Q8WX94 980 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 NSL1Q96IY1 281 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 CLMNQ96JQ2 1002 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 LPIN3Q9BQK8 851 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 BTBD10Q9BSF8 475 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 KLC2Q9H0B6 622 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 ASB7Q9H672 318 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 ZNF395Q9H8N7 513 aaPredicted RBP7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 RNF19AQ9NV58 838 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 ETNK2Q9NVF9 386 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 ARMCX1Q9P291 453 aa7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 MTO1Q9Y2Z2 717 aaKnown RBP7.92□□□□□ -1.14
PPARGC1A-204ENST00000506055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ADM5C9JUS6 153 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 CYB561D2O14569 222 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SPAG6O75602 509 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SNRPAP09012 282 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ESRRAP11474 423 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 TFE3P19532 575 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SDC4P31431 198 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PTDSS1P48651 473 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SLC26A2P50443 739 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 CCNG1P51959 295 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 RBP5P82980 135 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 CDK16Q00536 496 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PDK2Q15119 407 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 AMHR2Q16671 573 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MROH9Q5TGP6 573 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 VPS52Q8N1B4 723 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 C7orf31Q8N865 590 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MCUR1Q96AQ8 359 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PTCD3Q96EY7 689 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 KIF12Q96FN5 646 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 NAF1Q96HR8 494 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ACAP3Q96P50 834 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SNRNP25Q9BV90 132 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 CXCL16Q9H2A7 254 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PCDH18Q9HCL0 1135 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 RBPJLQ9UBG7 517 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 GINS2Q9Y248 185 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 TTLL3Q9Y4R7 772 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PPP2R3BQ9Y5P8 575 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SNX9Q9Y5X1 595 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 NR2E3Q9Y5X4 410 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SLC15A5A6NIM6 579 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 GSC2O15499 205 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SLC25A27O95847 323 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ZNF286BP0CG31 522 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PAX7P23759 505 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ATXN1P54253 815 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 TTLL4Q14679 1199 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SPDYAQ5MJ70 313 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 WASHC2DQ5SRD0 308 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 LGSNQ5TDP6 509 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 DSTYKQ6XUX3 929 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 RINLQ6ZS11 566 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ALYREFQ86V81 257 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 CHSY1Q86X52 802 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MPP5Q8N3R9 675 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MICAL1Q8TDZ2 1067 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 OXNAD1Q96HP4 312 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MRPL45Q9BRJ2 306 aaKnown RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 VRTNQ9H8Y1 702 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 POPDC2Q9HBU9 364 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 GBA2Q9HCG7 927 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 BATF3Q9NR55 127 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 SMYD2Q9NRG4 433 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 MARCOQ9UEW3 520 aaPredicted RBP7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 ITGA11Q9UKX5 1188 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 PLLPQ9Y342 182 aa7.91□□□□□ -1.14
PPARGC1A-204ENST00000506055 I3L4J1 428 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TGDSO95455 350 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 METTL18O95568 372 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TGM2P21980 687 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 GRIA1P42261 906 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 CPA2P48052 419 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 IRX4P78413 519 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 MRPS5P82675 430 aaKnown RBP7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 SLC6A3Q01959 620 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 GBE1Q04446 702 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 INCA1Q0VD86 236 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 CHI3L2Q15782 390 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TRMT10BQ6PF06 316 aaKnown RBP7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 OLFML1Q6UWY5 402 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms