RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ALDH2P05091 517 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ITGAVP06756 1048 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 RPL21P46778 160 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 OR1G1P47890 313 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 PLTPP55058 493 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 HDAC4P56524 1084 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 DAOAP59103 153 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CBX1P83916 185 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ATP11AP98196 1134 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TLE2Q04725 743 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 YWHAHQ04917 246 aaPredicted RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ADCY2Q08462 1091 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ADIGQ0VDE8 80 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ELAVL2Q12926 359 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CALCOCO2Q13137 446 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 KRT81Q14533 505 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TAF5Q15542 800 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SMTNL2Q2TAL5 461 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SH3PXD2AQ5TCZ1 1133 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ZDHHC24Q6UX98 284 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 LRIG3Q6UXM1 1119 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 RFX6Q8HWS3 928 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NPAS4Q8IUM7 802 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC89Q8N998 374 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TSEN2Q8NCE0 465 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SLC35B2Q8TB61 432 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CLEC4CQ8WTT0 213 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ATG4AQ8WYN0 398 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 HSPH1Q92598 858 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NT5C3BQ969T7 300 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 MYLPFQ96A32 169 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 FAM149B1Q96BN6 582 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC114Q96M63 670 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CASD1Q96PB1 797 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 RNF157Q96PX1 679 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SLC2A13Q96QE2 648 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 RUFY1Q96T51 708 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 SLC9A7Q96T83 725 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NPY6RQ99463 290 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 FOXP3Q9BZS1 431 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NEUROG2Q9H2A3 272 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NRDE2Q9H7Z3 1164 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 POPDC2Q9HBU9 364 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ZDHHC18Q9NUE0 388 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TMEM51Q9NW97 253 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 PRKAG2Q9UGJ0 569 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 ZNF148Q9UQR1 794 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 NEU2Q9Y3R4 380 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TRANK1O15050 2925 aa8.4□□□□□ -1.07
COL4A5-208ENST00000505728 TSC2P49815 1807 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 OR6C75A6NL08 312 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 I3L4J1 428 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ZBED1O96006 694 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 F9P00740 461 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ATF2P15336 505 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ZFXP17010 805 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 IVDP26440 423 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 KLRC2P26717 231 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 OAS2P29728 719 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 RFC2P35250 354 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ADCY8P40145 1251 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 NDUFV1P49821 464 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 SULT1E1P49888 294 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 AIF1P55008 147 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 FAAP100Q0VG06 881 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 DPYSL3Q14195 570 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 SLMAPQ14BN4 828 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 OASLQ15646 514 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 DPYSL2Q16555 572 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 NFE2Q16621 373 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 CDO1Q16878 200 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 PAN2Q504Q3 1202 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 PM20D1Q6GTS8 502 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 CEP128Q6ZU80 1094 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 GSTA5Q7RTV2 222 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 BNIPLQ7Z465 357 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 SPATA2LQ8IUW3 424 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ALLCQ8N6M5 410 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ACTL9Q8TC94 416 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 FBXO25Q8TCJ0 367 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 HASPINQ8TF76 798 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 FAF2Q96CS3 445 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 SNF8Q96H20 258 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 FUBP3Q96I24 572 aaKnown RBP eCLIP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF670Q9BS34 389 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms