RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PPP6R2O75170 966 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 TIPRLO75663 272 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 LARGE1O95461 756 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A15PP0C7V4 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A14PP0C7W9 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 KCNA3P22001 575 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PRKAR1BP31321 381 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PSMC2P35998 433 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 GCLCP48506 637 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 DRG2P55039 364 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 LILRA4P59901 499 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 ARF3P61204 181 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 ARF1P84077 181 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PRKD1Q15139 912 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 BAK1Q16611 211 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 RNF151Q2KHN1 245 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM214AQ32MH5 1076 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 METTL24Q5JXM2 366 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC9C2Q5TAH2 1124 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 TAPT1Q6NXT6 567 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PDXDC1Q6P996 788 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 RNF207Q6ZRF8 634 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 XYLT1Q86Y38 959 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF280BQ86YH2 543 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 ARMC8Q8IUR7 673 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPATCH11Q8N954 259 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PSD4Q8NDX1 1056 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 MBD3L2Q8NHZ7 208 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 Q8TCH9 128 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 TBC1D22AQ8WUA7 517 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 LMF1Q96S06 567 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PNKPQ96T60 521 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 CPPED1Q9BRF8 314 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 SMYD2Q9NRG4 433 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 KRT84Q9NSB2 600 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 NKIRAS2Q9NYR9 191 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPR34Q9UPC5 381 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 USP22Q9UPT9 525 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 CNTN6Q9UQ52 1028 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 CDYLQ9Y232 598 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 NEU2Q9Y3R4 380 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 CYP46A1Q9Y6A2 500 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 PCSK5Q92824 1860 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCDC195A0A1B0GUA6 201 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 PI4KAP2A4QPH2 592 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 DRGXA6NNA5 263 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 CD3EAPO15446 510 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 SEPT4O43236 478 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 STC2O76061 302 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 HLA-DOAP06340 250 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 HK1P19367 917 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ITGALP20701 1170 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 GCSHP23434 173 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 RRM1P23921 792 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 PGM1P36871 562 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 POLD2P49005 469 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 RAC3P60763 192 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 MYO1EQ12965 1108 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 BOP1Q14137 746 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPR68Q15743 365 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 MEA1Q16626 185 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZIK1Q3SY52 487 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 TBRG1Q3YBR2 411 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 NOMO2Q5JPE7 1267 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF569Q5MCW4 686 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM205BPQ63HN1 556 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 SFRP4Q6FHJ7 346 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ANO7Q6IWH7 933 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCDC129Q6ZRS4 1044 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 LRRC8DQ7L1W4 858 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 POC1BQ8TC44 478 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 HMGB4Q8WW32 186 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF503Q96F45 646 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 HIST1H2AAQ96QV6 131 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 PTDSS2Q9BVG9 487 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 TLR10Q9BXR5 811 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 C12orf65Q9H3J6 166 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 ACAD9Q9H845 621 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 PRKRIP1Q9H875 184 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 LIN7CQ9NUP9 197 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 MRPS18AQ9NVS2 196 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 BAG5Q9UL15 447 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 DNAJC16Q9Y2G8 782 aa4.34□□□□□ -1.71
TRAPPC13-208ENST00000505553 VWA3AA6NCI4 1184 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 E7ENX8 843 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 PLOD3O60568 738 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 MFAP3LO75121 409 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 GUCY1B2O75343 617 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAF5LO75529 589 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 IPO13O94829 963 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 SPATA31D3P0C874 917 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 FCER1AP12319 257 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 ALOX12P18054 663 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 HOXD12P35452 270 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TOB1P50616 345 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 CCR9P51686 369 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms