RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 CCDC157Q569K6 752 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 DCAF12L1Q5VU92 463 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 TPGS1Q6ZTW0 290 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 PDZD8Q8NEN9 1154 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 OR6B3Q8NGW1 331 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 LARP4BQ92615 738 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 HVCN1Q96D96 273 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 STRA6Q9BX79 667 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 CCSER2Q9H7U1 834 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 TMEM30AQ9NV96 361 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 INTS13Q9NVM9 706 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 NFE2L3Q9Y4A8 694 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 CEP192Q8TEP8 1941 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 PLXND1Q9Y4D7 1925 aa12.28□□□□□ -0.44
CCHCR1-219ENST00000505392 GFRA2O00451 464 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 CLDN5O00501 218 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 ATXN7O15265 892 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 TNFSF14O43557 240 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 RTN3O95197 1032 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 PLA2G2AP14555 144 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 TYRP14679 529 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 GARTP22102 1010 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 OR5B17Q8NGF7 314 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 SCAMP5Q8TAC9 235 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 KCNK16Q96T55 309 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 DUSP9Q99956 384 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 CBWD1Q9BRT8 395 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 BBS2Q9BXC9 721 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 ZNF518BQ9C0D4 1074 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 NACA2Q9H009 215 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 EIF2B4Q9UI10 523 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 BTBD3Q9Y2F9 522 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 PCDHGB2Q9Y5G2 931 aa12.27□□□□□ -0.45
CCHCR1-219ENST00000505392 A0A1B0GVT2 93 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 KCNJ18B7U540 433 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 CACNG3O60359 315 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 GCNT3O95395 438 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 TNNC2P02585 160 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 DGKGP49619 791 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 GRIN1Q05586 938 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 SMAD1Q15797 465 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 DUOXA2Q1HG44 320 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 FUT11Q495W5 492 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 HTR3DQ70Z44 454 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 B3GNT5Q9BYG0 378 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 TRIM9Q9C026 710 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 ELOVL4Q9GZR5 314 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 MKRN2Q9H000 416 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 DPEP3Q9H4B8 488 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 PRORYQ9H606 182 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 USP36Q9P275 1121 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 WDR35Q9P2L0 1181 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 RAI2Q9Y5P3 530 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 STON1Q9Y6Q2 735 aa12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 HELZP42694 1942 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-219ENST00000505392 PTPRBP23467 1997 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 GOLGA4Q13439 2230 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 PLK4O00444 970 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 KCNK3O14649 394 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 TACC1O75410 805 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 PRPF6O94906 941 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 HLA-EP13747 358 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 OXTRP30559 389 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 TPMTP51580 245 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 STARD3Q14849 445 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 PTPRNQ16849 979 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 LRRC69Q6ZNQ3 347 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 TMPRSS6Q8IU80 811 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 GPD1LQ8N335 351 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 C1orf216Q8TAB5 229 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 BHMTQ93088 406 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 SIPA1Q96FS4 1042 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 SEL1LQ9UBV2 794 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 PTPRJQ12913 1337 aa12.25□□□□□ -0.45
CCHCR1-219ENST00000505392 ZNF233A6NK53 670 aa12.24□□□□□ -0.45
CCHCR1-219ENST00000505392 A8MXQ7 604 aa12.24□□□□□ -0.45
CCHCR1-219ENST00000505392 E9PAM4 449 aa12.24□□□□□ -0.45
CCHCR1-219ENST00000505392 GREM1O60565 184 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms