RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 PRDM8Q9NQV8 689 aa4.55□□□□□ -1.68
CPNE4-204ENST00000505331 PRMT7Q9NVM4 692 aaPredicted RBP4.55□□□□□ -1.68
CPNE4-204ENST00000505331 GCNT4Q9P109 453 aa4.55□□□□□ -1.68
CPNE4-204ENST00000505331 UXTQ9UBK9 157 aaPredicted RBP4.55□□□□□ -1.68
CPNE4-204ENST00000505331 ERRFI1Q9UJM3 462 aaPredicted RBP4.55□□□□□ -1.68
CPNE4-204ENST00000505331 GDAQ9Y2T3 454 aa4.55□□□□□ -1.68
CPNE4-204ENST00000505331 PCDHB11Q9Y5F2 797 aa4.55□□□□□ -1.68
CPNE4-204ENST00000505331 ENTPD2Q9Y5L3 495 aa4.55□□□□□ -1.68
CPNE4-204ENST00000505331 GOLGA4Q13439 2230 aaKnown RBP4.55□□□□□ -1.68
CPNE4-204ENST00000505331 CABIN1Q9Y6J0 2220 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CACNA1DQ01668 2161 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CCDC187A0A096LP49 1063 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 A0A0D9SFI3 127 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 A0A1B0GVM2 712 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TMEM200CA6NKL6 621 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TTLL8A6PVC2 850 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 LEFTY2O00292 366 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TRIM38O00635 465 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 IFIT3O14879 490 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TULP3O75386 442 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TADA3O75528 432 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 FSBPO95073 299 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 KIF20AO95235 890 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 P4HBP07237 508 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 PFKLP17858 780 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 HDCP19113 662 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 WT1P19544 449 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CIITAP33076 1130 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 GRIK1P39086 918 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 YARSP54577 528 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 NAPAP54920 295 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 HDAC4P56524 1084 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 ANAPC15P60006 121 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 ATP2C1P98194 919 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 FUT2Q10981 343 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SMARCB1Q12824 385 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 BNIP3Q12983 259 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CAPSQ13938 189 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 KCNB1Q14721 858 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 FAM187BQ17R55 369 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TMEM132AQ24JP5 1023 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TSR1Q2NL82 804 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 EIF2S3LQ2VIR3 472 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 DCAF4L1Q3SXM0 396 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 ZC2HC1CQ53FD0 456 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 XKR4Q5GH76 650 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 LRCH2Q5VUJ6 765 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SP5Q6BEB4 398 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CYB5R4Q7L1T6 521 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 GDF7Q7Z4P5 450 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 VASH2Q86V25 355 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TICAM2Q86XR7 235 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 ARL14EPQ8N8R7 260 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 FSIP1Q8NA03 581 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 PRR7Q8TB68 274 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 CPT1CQ8TCG5 803 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 MAPK15Q8TD08 544 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 LRRC15Q8TF66 581 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SCFD1Q8WVM8 642 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SLC5A5Q92911 643 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 LENG9Q96B70 501 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 EVI5LQ96CN4 794 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 ABHD17AQ96GS6 310 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 INTS4Q96HW7 963 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 FAM227BQ96M60 508 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 C5orf34Q96MH7 638 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SLC12A9Q9BXP2 914 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 OSBPL2Q9H1P3 480 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 USP29Q9HBJ7 922 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TOPORSQ9NS56 1045 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 EVA1BQ9NVM1 165 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 MAGED2Q9UNF1 606 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SLC5A6Q9Y289 635 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 TIMM13Q9Y5L4 95 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SPG11Q96JI7 2443 aa4.54□□□□□ -1.68
CPNE4-204ENST00000505331 SPTBN1Q01082 2364 aaKnown RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
CPNE4-204ENST00000505331 MTORP42345 2549 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 PTPRDP23468 1912 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 hCG_1642624A0A1W2PR95 340 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 PMS2P1A4D2B8 440 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 SMCO2A6NFE2 343 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 NPC1O15118 1278 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 NVLO15381 856 aaKnown RBP4.53□□□□□ -1.68
CPNE4-204ENST00000505331 MSH4O15457 936 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 HOXC11O43248 304 aaPredicted RBP4.53□□□□□ -1.68
CPNE4-204ENST00000505331 TCEA3O75764 348 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 PSMD10O75832 226 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 DDAH1O94760 285 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 PLEKHA8P1O95397 391 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 SEMA4FO95754 770 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 HAPLN1P10915 354 aaPredicted RBP4.53□□□□□ -1.68
CPNE4-204ENST00000505331 CD99P14209 185 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 KCNE1P15382 129 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 TYMPP19971 482 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 CD38P28907 300 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 ACSL1P33121 698 aa4.53□□□□□ -1.68
CPNE4-204ENST00000505331 HSPA4P34932 840 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms