RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 MAP3K7CLP57077 242 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 GFPT1Q06210 699 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXC1Q12948 553 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CUL4BQ13620 913 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 ZACNQ401N2 412 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CHPFQ8IZ52 775 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 SNX21Q969T3 373 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 DNAJC17Q9NVM6 304 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF510Q9Y2H8 683 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 EML5Q05BV3 1969 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PATE3B3GLJ2 98 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 MAPK13O15264 365 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 F13A1P00488 732 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 NR3C1P04150 777 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 SYPP08247 313 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 KRT13P13646 458 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 ENGP17813 658 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PTPRDP23468 1912 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 CASP1P29466 404 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PTGER3P43115 390 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 MAPK8P45983 427 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 SYCP2LQ5T4T6 812 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 KLHDC10Q6PID8 442 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 ARMCX6Q7L4S7 300 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 SFTPA1Q8IWL2 248 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 TTC39CQ8N584 583 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 SMOQ99835 787 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 NT5C1AQ9BXI3 368 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 MBD1Q9UIS9 605 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
UBE2D3-219ENST00000505207 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 GFRA2O00451 464 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 GIPC1O14908 333 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 NPC1O15118 1278 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 CACNG3O60359 315 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 NDUFS2O75306 463 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 VNN1O95497 513 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 SERPINF2P08697 491 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 RALAP11233 206 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 CCDC130P13994 396 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 TYRP14679 529 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 GNSP15586 552 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 GABRG2P18507 467 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 VAMP7P51809 220 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF132P52740 706 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 ENPEPQ07075 957 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 MESP2Q0VG99 397 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 STK4Q13043 487 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 KMT5BQ4FZB7 885 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 UNQ6494/PRO21346Q6UXR6 183 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 INTS8Q75QN2 995 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 FOXJ1Q92949 421 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
UBE2D3-219ENST00000505207 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms