RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FAM172AQ8WUF8 416 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 RAPGEF5Q92565 580 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 DPF3Q92784 378 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 CCDC97Q96F63 343 aaPredicted RBP10.87□□□□□ -0.67
TPM3-217ENST00000504663 SLITRK1Q96PX8 696 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 TTLL2Q9BWV7 592 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 WDR6Q9NNW5 1121 aaKnown RBP10.87□□□□□ -0.67
TPM3-217ENST00000504663 ANLNQ9NQW6 1124 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 KLHL11Q9NVR0 708 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM3-217ENST00000504663 HSFX1Q9UBD0 423 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 NAALADL1Q9UQQ1 740 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 SCML2Q9UQR0 700 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 LZTS1Q9Y250 596 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 SLC27A5Q9Y2P5 690 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 YIPF1Q9Y548 306 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 IRAK3Q9Y616 596 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 TRANK1O15050 2925 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 CEP104O60308 925 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CD48P09326 243 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CNPP09543 421 aaKnown RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 RARAP10276 462 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 ATF2P15336 505 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 HMGA1P17096 107 aaKnown RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 DNAJB2P25686 324 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 SDC4P31431 198 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CTNNB1P35222 781 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 NOS2P35228 1153 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 TERF1P54274 439 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 RWDD2BP57060 319 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 C2orf54Q08AI8 447 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 SLC25A52Q3SY17 297 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 TPGS2Q68CL5 300 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 LILRA6Q6PI73 481 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 MFSD7Q6UXD7 560 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 TAC4Q86UU9 113 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 SLC13A5Q86YT5 568 aaPredicted RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 SCN4BQ8IWT1 228 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 NUP93Q8N1F7 819 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CCDC185Q8N715 623 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CEP112Q8N8E3 955 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 SPATA4Q8NEY3 305 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 EXD1Q8NHP7 514 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 ZNF461Q8TAF7 563 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 GPR152Q8TDT2 470 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 DQX1Q8TE96 717 aaKnown RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 TSC1Q92574 1164 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 PGAP3Q96FM1 320 aaPredicted RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 PLVAPQ9BX97 442 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 MAGEB5Q9BZ81 275 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 POPDC2Q9HBU9 364 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 AAASQ9NRG9 546 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 RBM12Q9NTZ6 932 aaKnown RBP10.86□□□□□ -0.67
TPM3-217ENST00000504663 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 PCDHB12Q9Y5F1 795 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 LAMA3Q16787 3333 aa10.86□□□□□ -0.67
TPM3-217ENST00000504663 NOTCH4Q99466 2003 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 hCG_1818297A0A087WSY0 165 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 A0A1W2PQH9 124 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 SLC38A8A6NNN8 435 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 PI4K2BG5E9Z4 385 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 PGRMC1O00264 195 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 SART1O43290 800 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 KRT1P04264 644 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 CA3P07451 260 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 IL4RP24394 825 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 IRS1P35568 1242 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 PBX2P40425 430 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 CDKN2BP42772 138 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 SULT1E1P49888 294 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 YWHAGP61981 247 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM3-217ENST00000504663 ATP11AP98196 1134 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 CKAP4Q07065 602 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 CDO1Q16878 200 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 SMTNL2Q2TAL5 461 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 MGAT5BQ3V5L5 792 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 TMCO4Q5TGY1 634 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 BSPRYQ5W0U4 402 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 MSANTD2Q6P1R3 559 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 MMGT1Q8N4V1 131 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 PRELID2Q8N945 189 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 FAM149B1Q96BN6 582 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 FAF2Q96CS3 445 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 KLHL5Q96PQ7 755 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 SEPT5Q99719 369 aaPredicted RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 SNRNP25Q9BV90 132 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 MTIF3Q9H2K0 278 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
TPM3-217ENST00000504663 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms