RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 FCARP24071 287 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 AVPR1AP37288 418 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 GABRB2P47870 512 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC7A9P82251 487 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ZNF268Q14587 947 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 NAA35Q5VZE5 725 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 KLHDC10Q6PID8 442 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 PARM1Q6UWI2 310 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 GJD3Q8N144 294 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 MSANTD4Q8NCY6 345 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 NDRG1Q92597 394 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 NECAB3Q96P71 396 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC22A12Q96S37 553 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 CYP2S1Q96SQ9 504 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 PCDHB18PQ96TA0 734 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 MIS12Q9H081 205 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 KCNK12Q9HB15 430 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ZFP14Q9HCL3 533 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 TRPC7Q9HCX4 862 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 CD320Q9NPF0 282 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 OSER1Q9NX31 292 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 OBP2AQ9NY56 170 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 YJEFN3A6XGL0 299 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 E7ENQ6 273 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 COCHO43405 550 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TLR5O60602 858 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ADCY5O95622 1261 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 LTFP02788 710 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ERBB2P04626 1255 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CKMP06732 381 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 GLI1P08151 1106 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 SKILP12757 684 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 RARGP13631 454 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TCF3P15923 654 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 MMP8P22894 467 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CENPCQ03188 943 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CLEC16AQ2KHT3 1053 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TANGO2Q6ICL3 276 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 PPP1R2P3Q6NXS1 205 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 BEND5Q7L4P6 421 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ZNF571Q7Z3V5 609 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 RNF135Q8IUD6 432 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ZDHHC17Q8IUH5 632 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 FGF14Q92915 247 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 C18orf8Q96DM3 657 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TRIM62Q9BVG3 475 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ABCC13Q9NSE7 274 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 ARHGAP26Q9UNA1 814 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
PDLIM5-208ENST00000504489 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 MFAP3LO75121 409 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 PRAMEF12O95522 483 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 GZMAP12544 262 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 CDC25BP30305 580 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 SCNN1AP37088 669 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 VIPR2P41587 438 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 EFHC1Q5JVL4 640 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 HFE2Q6ZVN8 426 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 FAM183BPQ6ZVS7 135 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 PHF13Q86YI8 300 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 MFSD6LQ8IWD5 586 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 KIAA1958Q8N8K9 716 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms