RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 PRLP01236 227 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TMIGD3P0DMS9 266 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 HSPA1AP0DMV8 641 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 HSPA1BP0DMV9 641 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CD9P21926 228 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 PBX3P40426 434 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ACTR1AP61163 376 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CYP4A22Q5TCH4 519 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ZDHHC24Q6UX98 284 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 KCTD1Q719H9 257 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 METTL23Q86XA0 190 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 FAM9CQ8IZT9 166 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CCAR2Q8N163 923 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CCDC155Q8N6L0 562 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 GMCL1P1Q8NEA9 526 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MRGPRX4Q96LA9 322 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ATP13A1Q9HD20 1204 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SARS2Q9NP81 518 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 PI4KBQ9UBF8 816 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ZNF212Q9UDV6 495 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TNFSF13BQ9Y275 285 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MTO1Q9Y2Z2 717 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NAALAD2Q9Y3Q0 740 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CLCA3PQ9Y6N3 262 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 VWA3AA6NCI4 1184 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CAPN14A8MX76 684 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PRLRP16471 622 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 LAG3P18627 525 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 TRDNQ13061 729 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 EPHA7Q15375 998 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 KLHL24Q6TFL4 600 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 RUFY3Q7L099 469 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 FAM181AQ8N9Y4 354 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ST7LQ8TDW4 575 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PRCCQ92733 491 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 RAB7BQ96AH8 199 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PIP5K1AQ99755 562 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MAGEB5Q9BZ81 275 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MROH8Q9H579 483 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MMRN2Q9H8L6 949 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MAGEE1Q9HCI5 957 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 DDX43Q9NXZ2 648 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PSD3Q9NYI0 1048 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 TCFL5Q9UL49 500 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 UNC13AQ9UPW8 1703 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 EME2A4GXA9 379 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ACOT7O00154 380 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 E2F6O75461 281 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 IDH1O75874 414 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 METTL18O95568 372 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 HMGCRP04035 888 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CKBP12277 381 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NCF1P14598 390 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PGM1P36871 562 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NT5C2P49902 561 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ACTR2P61160 394 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CYP4F8P98187 520 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NHSL2Q5HYW2 709 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 AFAP1Q8N556 730 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 LINC00469Q8N7U9 141 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CYP2W1Q8TAV3 490 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CYFIP2Q96F07 1278 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SPXQ9BT56 116 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CCDC106Q9BWC9 280 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CACNG6Q9BXT2 260 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 TMPRSS13Q9BYE2 586 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PALMDQ9NP74 551 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NUMBLQ9Y6R0 609 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 IGSF1Q8N6C5 1336 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PYCARD-AS1I3L0S3 204 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 DNM1LO00429 736 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 IFIT3O14879 490 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 PCDH17O14917 1159 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 KLK10O43240 276 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SPRY1O43609 319 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 C4BPAP04003 597 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NFICP08651 508 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ARFIP2P53365 341 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CASP9P55211 416 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NME5P56597 212 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 TNK2Q07912 1038 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 EPS8Q12929 822 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SCARF1Q14162 830 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MAN2A1Q16706 1144 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SMU1Q2TAY7 513 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 BTBD8Q5XKL5 378 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SLFN12LQ6IEE8 588 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ANGPTL8Q6UXH0 198 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 MED25Q71SY5 747 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 GATAD2AQ86YP4 633 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ANKRD20A12PQ8NF67 263 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 ZNF671Q8TAW3 534 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 EXT2Q93063 718 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 SLC22A18Q96BI1 424 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms