RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM149B1Q96BN6 582 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 DEF6Q9H4E7 631 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 TASP1Q9H6P5 420 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 CYLDQ9NQC7 956 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 NAALADL1Q9UQQ1 740 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 PIEZO1Q92508 2521 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 SSU72P8A0A1W2PR75 194 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 AKR1B10O60218 316 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 TLR5O60602 858 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 RTN2O75298 545 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 OAS1P00973 400 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 LTFP02788 710 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 FYNP06241 537 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 LAMP2P13473 410 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 HDCP19113 662 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 VIPR2P41587 438 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 PPP3CCP48454 512 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 CDK17Q00537 523 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM102AQ5T9C2 384 aaPredicted RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 SNX30Q5VWJ9 437 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 ALKBH5Q6P6C2 394 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 SCML4Q8N228 414 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 TDRD5Q8NAT2 981 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 RSAD2Q8WXG1 361 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 IRGQQ8WZA9 623 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 RSPRY1Q96DX4 576 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 METTL5Q9NRN9 209 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 NENFQ9UMX5 172 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM50BQ9Y247 325 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
PDLIM7-212ENST00000504380 NCANO14594 1321 aa13.9□□□□□ -0.19
PDLIM7-212ENST00000504380 TRAV19A0A0A6YYK7 116 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 GOLGA6L6A8MZA4 724 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ZNF263O14978 683 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 PRAMEF12O95522 483 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RALAP11233 206 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 GZMAP12544 262 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ABCB4P21439 1286 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 FECHP22830 423 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RRM1P23921 792 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 SNX16P57768 344 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ZXDBP98169 803 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 EFEMP1Q12805 493 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ZNF268Q14587 947 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 C10orf120Q5SQS8 335 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 SYPL2Q5VXT5 272 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 TANGO2Q6ICL3 276 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 TRNP1Q6NT89 227 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 PARM1Q6UWI2 310 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RAD9BQ6WBX8 426 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RSRC2Q7L4I2 434 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 TMEM139Q8IV31 216 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ARID3BQ8IVW6 561 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 DEFB106AQ8N104 65 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ARHGAP18Q8N392 663 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 MSANTD4Q8NCY6 345 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 JOSD2Q8TAC2 188 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 WBP2Q969T9 261 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 BAG1Q99933 345 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 PLA2G2FQ9BZM2 168 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 ISCUQ9H1K1 167 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 GKN1Q9NS71 199 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.89□□□□□ -0.199e-8■■■■■ 27
PDLIM7-212ENST00000504380 MYO1AQ9UBC5 1043 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 SFMBT1Q9UHJ3 866 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
PDLIM7-212ENST00000504380 SCAMP3O14828 347 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 CALB1P05937 261 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 CKMP06732 381 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 HMBSP08397 361 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 IRF1P10914 325 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 NCAM1P13591 858 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 FCARP24071 287 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 GALCP54803 685 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 YWHAZP63104 245 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 SLC18A3Q16572 532 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 MIB1Q86YT6 1006 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 EMC1Q8N766 993 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 ADAM32Q8TC27 787 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 RNF139Q8WU17 664 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 FGF14Q92915 247 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms