RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 DKC1O60832 514 aaKnown RBP eCLIP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FGF18O76093 207 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HAUS5O94927 633 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 INMTO95050 263 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GPANK1O95872 356 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TBX18O95935 607 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 THP07101 528 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PARP1P09874 1014 aaKnown RBP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ITGAMP11215 1152 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FCER1AP12319 257 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 STAT1P42224 750 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 IL12RB1P42701 662 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MMP14P50281 582 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SNX16P57768 344 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CXADRP78310 365 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SPARCL1Q14515 664 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SMN1Q16637 294 aaKnown RBP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 RILPL1Q5EBL4 403 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LCA5Q86VQ0 697 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PRR18Q8N4B5 295 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FITM2Q8N6M3 262 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZNF713Q8N859 430 aaPredicted RBP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ARL10Q8N8L6 244 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 UCMAQ8WVF2 138 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CCDC34Q96HJ3 373 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SDF4Q9BRK5 362 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 STK31Q9BXU1 1019 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MRPL9Q9BYD2 267 aaKnown RBP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MRGBPQ9NV56 204 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SYBUQ9NX95 663 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 RNF181Q9P0P0 153 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HSFX1Q9UBD0 423 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ABCF2Q9UG63 623 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PACSIN3Q9UKS6 424 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TMCC3Q9ULS5 477 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GPR34Q9UPC5 381 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 COL4A3Q01955 1670 aa4.75□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TECPR2O15040 1411 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PTCH1Q13635 1447 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NCOA3Q9Y6Q9 1424 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 A0A087X0M5 115 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 A0A1B0GX30 115 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PIPSLA2A3N6 862 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 OVOL3O00110 214 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FRS3O43559 492 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SGTAO43765 313 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZFPL1O95159 310 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CD1AP06126 327 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CKBP12277 381 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MYF5P13349 255 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 IDEP14735 1019 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZNF131P52739 623 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DCAF7P61962 342 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZNF543Q08ER8 600 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DCTN1Q14203 1278 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SMC1AQ14683 1233 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 POSTNQ15063 836 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ATP2B3Q16720 1220 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZACNQ401N2 412 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SPDYE7PQ495Y7 208 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TTC31Q49AM3 519 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GLIPR1L2Q4G1C9 344 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ARMC6Q6NXE6 501 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CCDC129Q6ZRS4 1044 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ENOSF1Q7L5Y1 443 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MAEAQ7L5Y9 396 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GPR149Q86SP6 731 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TMTC1Q8IUR5 882 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GALNT15Q8N3T1 639 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SLC44A3Q8N4M1 653 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SUPT20HQ8NEM7 779 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LINC00476Q8WZB0 136 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MRGPRX4Q96LA9 322 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TOR3AQ9H497 397 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GRHPRQ9UBQ7 328 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TESQ9UGI8 421 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 KCNE5Q9UJ90 142 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MTO1Q9Y2Z2 717 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PCDHB1Q9Y5F3 818 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LRPPRCP42704 1394 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PLEKHH1Q9ULM0 1364 aa4.74□□□□□ -1.65
PDLIM1P4-201ENST00000504327 YTHDC2Q9H6S0 1430 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ARHGEF17Q96PE2 2063 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LAMC1P11047 1609 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 KNDC1Q76NI1 1749 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 POM121BA6NF01 834 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 POLBP06746 335 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HKR1P10072 659 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CNTFP26441 200 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PDIA3P30101 505 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 AVPR1BP47901 424 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NPTX2P47972 431 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ALDH9A1P49189 494 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms