RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 NCOR1O75376 2440 aa7.34□□□□□ -1.23
SNX25-202ENST00000504273 A6NJR5 290 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 CCT8L1PA6NM43 557 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 APOC4-APOC2K7ER74 178 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 PIRO00625 290 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 CDH16O75309 829 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 AP1G2O75843 785 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 RASSF9O75901 435 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 APOC2P02655 101 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 TAC1P20366 129 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 LMO2P25791 158 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 SSTR1P30872 391 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 ATXN1P54253 815 aaKnown RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 PDIA2Q13087 525 aaKnown RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 MTM1Q13496 603 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 NOMO1Q15155 1222 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 EFHC2Q5JST6 749 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 MORN1Q5T089 497 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 ZFYVE27Q5T4F4 411 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 RNF187Q5TA31 235 aaPredicted RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 GKAP1Q5VSY0 366 aaPredicted RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 OLFML2BQ68BL8 750 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 TAOK1Q7L7X3 1001 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 DPH6Q7L8W6 267 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 SCUBE3Q8IX30 993 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 SRRM1Q8IYB3 904 aaKnown RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 ANKRD42Q8N9B4 389 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 FAM71DQ8N9W8 422 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 KCTD6Q8NC69 237 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 ARRDC4Q8NCT1 418 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 GDAP1Q8TB36 358 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 CCHCR1Q8TD31 782 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 CNPY3Q9BT09 278 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 MAK16Q9BXY0 300 aaKnown RBP7.34□□□□□ -1.24
SNX25-202ENST00000504273 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 FGFR1OP2Q9NVK5 253 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 CNTN3Q9P232 1028 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 ACTL7BQ9Y614 415 aa7.34□□□□□ -1.24
SNX25-202ENST00000504273 HAS3O00219 553 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 TYROBPO43914 113 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ASMTLO95671 621 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 F2P00734 622 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 IFNB1P01574 187 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 AKAP5P24588 427 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SCTRP47872 440 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 HDAC4P56524 1084 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 CCNA1P78396 465 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ITIH4Q14624 930 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 KCNJ11Q14654 390 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 KYAT1Q16773 422 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 XKR4Q5GH76 650 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 GLRA4Q5JXX5 417 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 C9orf57Q5W0N0 161 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 IQSEC1Q6DN90 963 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 DNAJC14Q6Y2X3 702 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 CAPN12Q6ZSI9 719 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 MICALCLQ6ZW33 695 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 NT5DC4Q86YG4 428 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 RFX6Q8HWS3 928 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ZBED8Q8IZ13 594 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 PCDH19Q8TAB3 1148 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 CABS1Q96KC9 395 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 OSMRQ99650 979 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 STMN4Q9H169 189 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.33□□□□□ -1.24
SNX25-202ENST00000504273 ABCF3Q9NUQ8 709 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 FAM49BQ9NUQ9 324 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 DERAQ9Y315 318 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 BPTFQ12830 3046 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SPAG7O75391 227 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 PDGFRAP16234 1089 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 HNRNPH1P31943 449 aaKnown RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 CETN2P41208 172 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 GCLCP48506 637 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 EIF3EP60228 445 aaKnown RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 PRKCZQ05513 592 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SLC10A2Q12908 348 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 TMED2Q15363 201 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SLC1A5Q15758 541 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 DGKDQ16760 1214 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 HADHQ16836 314 aaKnown RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 GALNTL6Q49A17 601 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 OR6B2Q6IFH4 312 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SLC27A1Q6PCB7 646 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 PPIL6Q8IXY8 311 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 DCAKDQ8WVC6 231 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 CENPIQ92674 756 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 FAF2Q96CS3 445 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 RNF157Q96PX1 679 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 FRMD8P1Q9BZ68 369 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 FAM49AQ9H0Q0 323 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ZNF576Q9H609 170 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 PLEKHA5Q9HAU0 1116 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 PCDH18Q9HCL0 1135 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 ASNSD1Q9NWL6 643 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms