RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 E2F8A0AVK6 867 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 TRIM66O15016 1216 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 GCNT3O95395 438 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 NTSR1P30989 418 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 C10orf76Q5T2E6 689 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 TDRD10Q5VZ19 366 aaKnown RBP16.77■□□□□ 0.28
DDR1-250ENST00000503628 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 SLCO6A1Q86UG4 719 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 DDX42Q86XP3 938 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDR1-250ENST00000503628 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.28
DDR1-250ENST00000503628 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 ZNF419Q96HQ0 510 aaPredicted RBP16.77■□□□□ 0.28
DDR1-250ENST00000503628 HPDLQ96IR7 371 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 LRIG1Q96JA1 1093 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 DEC1Q9P2X7 70 aa16.77■□□□□ 0.28
DDR1-250ENST00000503628 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
DDR1-250ENST00000503628 URB1O60287 2271 aaKnown RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 ASXL3Q9C0F0 2248 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 TRIM24O15164 1050 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 ZBTB24O43167 697 aaPredicted RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 ZNF217O75362 1048 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 NDUFV2P19404 249 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 MAOBP27338 520 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 CACNA2D1P54289 1103 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 UBE2HP62256 183 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 EHHADHQ08426 723 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 IFRD2Q12894 506 aaPredicted RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 MYO1EQ12965 1108 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 ALCAMQ13740 583 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 TOGARAM2Q6ZUX3 1019 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 TMEM25Q86YD3 366 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 OTUB2Q96DC9 234 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 C8orf48Q96LL4 319 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 SLITRK1Q96PX8 696 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 ACOX2Q99424 681 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 FAM124BQ9H5Z6 455 aaPredicted RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 CD93Q9NPY3 652 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 EXOC7Q9UPT5 735 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
DDR1-250ENST00000503628 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
DDR1-250ENST00000503628 FLNBO75369 2602 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 HELZ2Q9BYK8 2649 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 EIF4E1BA6NMX2 242 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 HOXC11O43248 304 aaPredicted RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 KLRC4O43908 158 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 NDUFS2O75306 463 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 GARTP22102 1010 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 WARSP23381 471 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 CASP5P51878 434 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 ANO4Q32M45 955 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 MDH1BQ5I0G3 518 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 EGFLAMQ63HQ2 1017 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 NUDT18Q6ZVK8 323 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 STXBP4Q6ZWJ1 553 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 ZFRQ96KR1 1074 aaKnown RBP16.75■□□□□ 0.27
DDR1-250ENST00000503628 TIGD1Q96MW7 591 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 CBWD1Q9BRT8 395 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
DDR1-250ENST00000503628 COCHO43405 550 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 GNSP15586 552 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 DPYDQ12882 1025 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 GRIK2Q13002 908 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 GLRX5Q86SX6 157 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 BBS7Q8IWZ6 715 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 WBP2Q969T9 261 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 MMS19Q96T76 1030 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SLC6A17Q9H1V8 727 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SCUBE2Q9NQ36 999 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SPHK2Q9NRA0 654 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 INTS13Q9NVM9 706 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SUSD2Q9UGT4 822 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 CHORDC1Q9UHD1 332 aaPredicted RBP16.74■□□□□ 0.27
DDR1-250ENST00000503628 PCOLCE2Q9UKZ9 415 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 SH3BP1Q9Y3L3 701 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 STARD13Q9Y3M8 1113 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
DDR1-250ENST00000503628 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDR1-250ENST00000503628 RPN1P04843 607 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms