RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 MAOBP27338 520 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 MYL6P60660 151 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 SYCP2LQ5T4T6 812 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 FAM173BQ6P4H8 233 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 BHMTQ93088 406 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 XPO6Q96QU8 1125 aaKnown RBP13.79□□□□□ -0.2
TRIO-205ENST00000503399 BBS2Q9BXC9 721 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 FAM124BQ9H5Z6 455 aaPredicted RBP13.79□□□□□ -0.2
TRIO-205ENST00000503399 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
TRIO-205ENST00000503399 KRT82Q9NSB4 513 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 CACNA2D2Q9NY47 1150 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 ADAMTS20P59510 1910 aa13.79□□□□□ -0.2
TRIO-205ENST00000503399 MEI4A8MW99 385 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 TLR5O60602 858 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 AP1G2O75843 785 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 TYRP14679 529 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 TUBP50607 506 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 CDH8P55286 799 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 GRIK2Q13002 908 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 SLC14A1Q13336 389 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 BIRC3Q13489 604 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 PSMD6Q15008 389 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 NELFCDQ8IXH7 590 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
TRIO-205ENST00000503399 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
TRIO-205ENST00000503399 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
TRIO-205ENST00000503399 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
TRIO-205ENST00000503399 PRRT4C9JH25 899 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 CACNG3O60359 315 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 HOXD13P35453 343 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 ASIC1P78348 528 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 GOLGA8FQ08AF8 430 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 GOLGA8DPQ0D2H9 430 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 COL28A1Q2UY09 1125 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 WDR45BQ5MNZ6 344 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 SNX30Q5VWJ9 437 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 ADAMTS14Q8WXS8 1223 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 FOXJ1Q92949 421 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
TRIO-205ENST00000503399 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 GABRG3Q99928 467 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 TRIM9Q9C026 710 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 MIR1-1HGQ9H1L0 117 aa13.77□□□□□ -0.21
TRIO-205ENST00000503399 APOBEC2Q9Y235 224 aaKnown RBP13.77□□□□□ -0.21
TRIO-205ENST00000503399 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 WASH3PC4AMC7 463 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 EIF3DO15371 548 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRIO-205ENST00000503399 GJB3O75712 270 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 TBX18O95935 607 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 CAPNS1P04632 268 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 ZDHHC11BP0C7U3 371 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 CCDC130P13994 396 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 CD6P30203 668 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 ATICP31939 592 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 DGKGP49619 791 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 PGFP49763 221 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 ORC1Q13415 861 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 FAM26FQ5R3K3 315 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 PAQR9Q6ZVX9 377 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 HTR3DQ70Z44 454 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 ZCCHC9Q8N567 271 aaKnown RBP13.76□□□□□ -0.21
TRIO-205ENST00000503399 XXYLT1Q8NBI6 393 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 SETD7Q8WTS6 366 aaKnown RBP13.76□□□□□ -0.21
TRIO-205ENST00000503399 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 DUSP9Q99956 384 aaKnown RBP13.76□□□□□ -0.21
TRIO-205ENST00000503399 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
TRIO-205ENST00000503399 PLK2Q9NYY3 685 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 WDR35Q9P2L0 1181 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 MYH10P35580 1976 aa13.76□□□□□ -0.21
TRIO-205ENST00000503399 TGFB1I1O43294 461 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 STAU1O95793 577 aaKnown RBP13.75□□□□□ -0.21
TRIO-205ENST00000503399 PDCP20941 246 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 CASP4P49662 377 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 STARD3Q14849 445 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
TRIO-205ENST00000503399 FUKQ8N0W3 1084 aa13.75□□□□□ -0.21
TRIO-205ENST00000503399 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms