RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DECR2Q9NUI1 292 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 GALNT8Q9NY28 637 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARHGAP20Q9P2F6 1191 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF212Q9UDV6 495 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 AJAP1Q9UKB5 411 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ADAMTS6Q9UKP5 1117 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 HSF4Q9ULV5 492 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 AGTPBP1Q9UPW5 1226 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 MTF2Q9Y483 593 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 NRKQ7Z2Y5 1582 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 LMO7Q8WWI1 1683 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CPDO75976 1380 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 GLI3P10071 1580 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 USP6P35125 1406 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CCDC78A2IDD5 438 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF839A8K0R7 811 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SGTAO43765 313 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBX10O75333 385 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TSPAN9O75954 239 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLU7O95391 586 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHGBP05060 677 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 HSPA1AP0DMV8 641 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 HSPA1BP0DMV9 641 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 NPPBP16860 134 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 PFKLP17858 780 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 GGT5P36269 586 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 GPR15P49685 360 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MCM2P49736 904 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 BCAT1P54687 386 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TPD52P55327 224 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 POLE2P56282 527 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SOX8P57073 446 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF200P98182 395 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CDC42EP1Q00587 391 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 EXOSC9Q06265 439 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MGAT2Q10469 447 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SCAPQ12770 1279 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TFCP2Q12800 502 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLC13A2Q13183 592 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CTBP1Q13363 440 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MPP3Q13368 585 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 NOLC1Q14978 699 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 KCNMB1Q16558 191 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 BAK1Q16611 211 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 WDR72Q3MJ13 1102 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CCDC178Q5BJE1 867 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 FAM69AQ5T7M9 428 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 RAP1GAP2Q684P5 730 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 RAB12Q6IQ22 244 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MFSD5Q6N075 450 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MTFR2Q6P444 385 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 DCLRE1AQ6PJP8 1040 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 KLHL24Q6TFL4 600 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MPZL3Q6UWV2 235 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 KIAA0408Q6ZU52 694 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 OTOP2Q7RTS6 562 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 NUP54Q7Z3B4 507 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ANKS1BQ7Z6G8 1248 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLFN11Q7Z7L1 901 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARHGEF25Q86VW2 580 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MIB1Q86YT6 1006 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 IRF2BP1Q8IU81 584 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MOSPD2Q8NHP6 518 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 BRIX1Q8TDN6 353 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 KBTBD7Q8WVZ9 684 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBC1D5Q92609 795 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 STAMQ92783 540 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SDCCAG3Q96C92 435 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 RBM18Q96H35 190 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 APOPT1Q96IL0 206 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMX3Q96JJ7 454 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 CLIC6Q96NY7 704 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 RTKNQ9BST9 563 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 PCDHAC1Q9H158 963 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 OR10A5Q9H207 317 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 MRPL46Q9H2W6 279 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 BCAS3Q9H6U6 928 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 PDE7BQ9NP56 450 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 DLL4Q9NR61 685 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 RBM12Q9NTZ6 932 aaKnown RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 C19orf73Q9NVV2 129 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 SIRT5Q9NXA8 310 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 KCMF1Q9P0J7 381 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 BTBD7Q9P203 1132 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBC1D14Q9P2M4 693 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 FTSJ1Q9UET6 329 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZMYND8Q9ULU4 1186 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATP6V0A2Q9Y487 856 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ACEP12821 1306 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 AFF2P51816 1311 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 QRICH2Q9H0J4 1663 aa4.67□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARHGEF10O15013 1369 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ROCK2O75116 1388 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 NRAPQ86VF7 1730 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 COL18A1P39060 1754 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 RGS12O14924 1447 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SCO2A0A1W2PP80 73 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 E7EVH7 732 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms