RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 ATG4AQ8WYN0 398 aa12.89□□□□□ -0.35
LRPAP1-202ENST00000500728 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
LRPAP1-202ENST00000500728 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
LRPAP1-202ENST00000500728 TNFRSF21O75509 655 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 FGFR1P11362 822 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 KLRC1P26715 233 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 FEZF2Q8TBJ5 459 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 GLRA3O75311 464 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 THPOP40225 353 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 TRAF3Q13114 568 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 KCNV1Q6PIU1 500 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 BTN3A3O00478 584 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 NPEPPSP55786 919 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 CCL15Q16663 113 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 DGKDQ16760 1214 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 IQCMA0A1B0GVH7 501 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 KATNA1O75449 491 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 YWHAQP27348 245 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 POLD3Q15054 466 aaPredicted RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 TCEA2Q15560 299 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 MACC1Q6ZN28 852 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 MGAT4DA6NG13 374 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 NOS3P29474 1203 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 STARD3Q14849 445 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 TRMT5Q32P41 509 aaKnown RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 NRDE2Q9H7Z3 1164 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 MAPK7Q13164 816 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 SLITRK1Q96PX8 696 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 GPRC5DQ9NZD1 345 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
LRPAP1-202ENST00000500728 DGAT1O75907 488 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 FASP25445 335 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 VAC14Q08AM6 782 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 STX4Q12846 297 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 DGUOKQ16854 277 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 COMMD8Q9NX08 183 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 O00370 1275 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 QKIQ96PU8 341 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RPRD1BQ9NQG5 326 aaKnown RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 SPACA6W5XKT8 324 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 LCA5LO95447 670 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 BGNP21810 368 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 KRT20P35900 424 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 XKR3Q5GH77 459 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CLEC17AQ6ZS10 378 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RNASE11Q8TAA1 199 aaKnown RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RMND5BQ96G75 393 aaPredicted RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CYP39A1Q9NYL5 469 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 ATG7O95352 703 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 AGKQ53H12 422 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RORBQ92753 470 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 A0A1W2PQJ5 194 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 FCGR1AP12314 374 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 PNMA8CA0A1B0GUJ8 204 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 SLC34A1Q06495 639 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 STK4Q13043 487 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 ITGB3BPQ13352 177 aaPredicted RBP12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 TMEM26Q6ZUK4 368 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 CYP4Z1Q86W10 505 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 EID3Q8N140 333 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
LRPAP1-202ENST00000500728 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms