RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 FNDC3AQ9Y2H6 1198 aaKnown RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 MUC22E2RYF6 1773 aaPredicted RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 TRABD2BA6NFA1 517 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 A8MXQ7 604 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 FLRT2O43155 660 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 ATXN1LP0C7T5 689 aaKnown RBP12.37□□□□□ -0.43
CDK9-205ENST00000498339 TYRP14679 529 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 IDEP14735 1019 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 GAP43P17677 238 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
CDK9-205ENST00000498339 GRIN1Q05586 938 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 IL27RAQ6UWB1 636 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 CACUL1Q86Y37 369 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 OVCA2Q8WZ82 227 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 BHMTQ93088 406 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 GABRG3Q99928 467 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
CDK9-205ENST00000498339 GMIPQ9P107 970 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 KIAA1522Q9P206 1035 aaPredicted RBP12.37□□□□□ -0.43
CDK9-205ENST00000498339 CHORDC1Q9UHD1 332 aaPredicted RBP12.37□□□□□ -0.43
CDK9-205ENST00000498339 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
CDK9-205ENST00000498339 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
CDK9-205ENST00000498339 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
CDK9-205ENST00000498339 DGKGP49619 791 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 CASP5P51878 434 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 SURF1Q15526 300 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 KIF2CQ99661 725 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDK9-205ENST00000498339 TMEM30AQ9NV96 361 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 DKK4Q9UBT3 224 aa12.36□□□□□ -0.43
CDK9-205ENST00000498339 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
CDK9-205ENST00000498339 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDK9-205ENST00000498339 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 A0A087WV48 116 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 WASH3PC4AMC7 463 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 PRRT4C9JH25 899 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 CACNG3O60359 315 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 BMP15O95972 392 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
CDK9-205ENST00000498339 ACADMP11310 421 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 TUBP50607 506 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 SLC5A3P53794 718 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 ALCAMQ13740 583 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
CDK9-205ENST00000498339 HLA-BQ31612 363 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 FUT11Q495W5 492 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 SCAMP5Q8TAC9 235 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 DNASE2BQ8WZ79 361 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 WBP2Q969T9 261 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 STRA6Q9BX79 667 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 CD248Q9HCU0 757 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 TOR4AQ9NXH8 423 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 WSB2Q9NYS7 404 aaPredicted RBP12.35□□□□□ -0.43
CDK9-205ENST00000498339 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
CDK9-205ENST00000498339 ASH1LQ9NR48 2969 aaKnown RBP12.35□□□□□ -0.43
CDK9-205ENST00000498339 A0A1B0GVT2 93 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 GFRA2O00451 464 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 SYNCRIPO60506 623 aaKnown RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 TLR5O60602 858 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 TNNI1P19237 187 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 TXLNAP40222 546 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 WDR72Q3MJ13 1102 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 CBWD2Q8IUF1 395 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 BAHD1Q8TBE0 780 aaPredicted RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 TRIM9Q9C026 710 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
CDK9-205ENST00000498339 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 EIF2B4Q9UI10 523 aaKnown RBP12.34□□□□□ -0.43
CDK9-205ENST00000498339 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms