RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 TTYH3Q9C0H2 523 aa20.76■□□□□ 0.91
HLA-B-255ENST00000498007 RBSNQ9H1K0 784 aa20.76■□□□□ 0.91
HLA-B-255ENST00000498007 SYNCQ9H7C4 482 aa20.76■□□□□ 0.91
HLA-B-255ENST00000498007 CFAP97Q9P2B7 532 aa20.76■□□□□ 0.91
HLA-B-255ENST00000498007 COL4A3Q01955 1670 aa20.76■□□□□ 0.91
HLA-B-255ENST00000498007 CUL9Q8IWT3 2517 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 TMEM221A6NGB7 291 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 M0R296 226 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 CHADO15335 359 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 FERP16591 822 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 RPL34P49207 117 aaKnown RBP20.75■□□□□ 0.91
HLA-B-255ENST00000498007 EFEMP1Q12805 493 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 ASIC2Q16515 512 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 PTPN20Q4JDL3 420 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 BSPRYQ5W0U4 402 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 TRIM68Q6AZZ1 485 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 DDX42Q86XP3 938 aaKnown RBP eCLIP20.75■□□□□ 0.91
HLA-B-255ENST00000498007 SIX5Q8N196 739 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 FAM149B1Q96BN6 582 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 ZFRQ96KR1 1074 aaKnown RBP20.75■□□□□ 0.91
HLA-B-255ENST00000498007 CDK5RAP1Q96SZ6 601 aaKnown RBP20.75■□□□□ 0.91
HLA-B-255ENST00000498007 NUP58Q9BVL2 599 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
HLA-B-255ENST00000498007 DNMT3LQ9UJW3 386 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 MYO6Q9UM54 1294 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 WNT6Q9Y6F9 365 aa20.75■□□□□ 0.91
HLA-B-255ENST00000498007 PAPSS1O43252 624 aaPredicted RBP20.74■□□□□ 0.91
HLA-B-255ENST00000498007 LSM8O95777 96 aaKnown RBP20.74■□□□□ 0.91
HLA-B-255ENST00000498007 LTFP02788 710 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 CCDC172P0C7W6 258 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 TCF3P15923 654 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 CHRNB2P17787 502 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 IFNAR2P48551 515 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 FMO1Q01740 532 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 TNK2Q07912 1038 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 FIGNQ5HY92 759 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 IER5LQ5T953 404 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 NAA35Q5VZE5 725 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 TMEM110Q86TL2 294 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 GAS2L3Q86XJ1 694 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 TTC8Q8TAM2 541 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 CSGALNACT1Q8TDX6 532 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 RNF139Q8WU17 664 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 CPLX3Q8WVH0 158 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 DNASE1L2Q92874 299 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 ARHGEF3Q9NR81 526 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 HEBP1Q9NRV9 189 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 GKN1Q9NS71 199 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 WNT16Q9UBV4 365 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 SH3BP1Q9Y3L3 701 aa20.74■□□□□ 0.91
HLA-B-255ENST00000498007 ARNTLO00327 626 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 SART1O43290 800 aaKnown RBP20.73■□□□□ 0.91
HLA-B-255ENST00000498007 ERBB2P04626 1255 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 CDH5P33151 784 aaPredicted RBP20.73■□□□□ 0.91
HLA-B-255ENST00000498007 NOMO3P69849 1222 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 GOLGA8FQ08AF8 430 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 GOLGA8DPQ0D2H9 430 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 SFMBT2Q5VUG0 894 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 KLHDC10Q6PID8 442 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 FAM183BPQ6ZVS7 135 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 FMNL3Q8IVF7 1028 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 CPA5Q8WXQ8 436 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 PIWIL1Q96J94 861 aaKnown RBP20.73■□□□□ 0.91
HLA-B-255ENST00000498007 EDEM3Q9BZQ6 932 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 EBF3Q9H4W6 596 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 ABCC13Q9NSE7 274 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 DUS2Q9NX74 493 aaKnown RBP20.73■□□□□ 0.91
HLA-B-255ENST00000498007 MARCH2Q9P0N8 246 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 ITIH6Q6UXX5 1313 aa20.73■□□□□ 0.91
HLA-B-255ENST00000498007 KRBA1A5PL33 1030 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 PDGFBP01127 241 aaPredicted RBP20.72■□□□□ 0.91
HLA-B-255ENST00000498007 HMBSP08397 361 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 ARSAP15289 507 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 SNX16P57768 344 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 MLF2Q15773 248 aaPredicted RBP20.72■□□□□ 0.91
HLA-B-255ENST00000498007 E4F1Q66K89 784 aaPredicted RBP20.72■□□□□ 0.91
HLA-B-255ENST00000498007 OR6B2Q6IFH4 312 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 OSCP1Q8WVF1 389 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 AGPAT1Q99943 283 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 KLF16Q9BXK1 252 aaPredicted RBP20.72■□□□□ 0.91
HLA-B-255ENST00000498007 MFSD1Q9H3U5 465 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 C11orf16Q9NQ32 467 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 OLA1Q9NTK5 396 aaKnown RBP20.72■□□□□ 0.91
HLA-B-255ENST00000498007 GTSE1Q9NYZ3 720 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 STRIP2Q9ULQ0 834 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 TECTAO75443 2155 aa20.72■□□□□ 0.91
HLA-B-255ENST00000498007 A0A1W2PQJ5 194 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 GYPCP04921 128 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 KPNA1P52294 538 aaPredicted RBP20.71■□□□□ 0.91
HLA-B-255ENST00000498007 PDGFRLQ15198 375 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 SLC44A4Q53GD3 710 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 C2CD6Q53TS8 623 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 TRIM72Q6ZMU5 477 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 TPRG1Q6ZUI0 275 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 IRF2BP2Q7Z5L9 587 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 ERICH1Q86X53 443 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 ZNF276Q8N554 614 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 MSANTD4Q8NCY6 345 aa20.71■□□□□ 0.91
HLA-B-255ENST00000498007 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
HLA-B-255ENST00000498007 WBP2Q969T9 261 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms