RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZBED6P86452 979 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 UBE2SQ16763 222 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 UGT8Q16880 541 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 MBNL2Q5VZF2 373 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 SPOCD1Q6ZMY3 1216 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 HEATR3Q7Z4Q2 680 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 GALNT5Q7Z7M9 940 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 SERINC5Q86VE9 423 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 TMEM199Q8N511 208 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 ESX1Q8N693 406 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 LSMEM1Q8N8F7 131 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 BICD2Q8TD16 824 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 LENG9Q96B70 501 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 RSRC1Q96IZ7 334 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 SPATA33Q96N06 139 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 COLEC11Q9BWP8 271 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 UPF3BQ9BZI7 483 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 UNKQ9C0B0 810 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 LMAN2LQ9H0V9 348 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 ZMAT4Q9H898 229 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 BRD9Q9H8M2 597 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 KCNH7Q9NS40 1196 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 IRAK4Q9NWZ3 460 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 NSMCE4AQ9NXX6 385 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 TMEFF2Q9UIK5 374 aaPredicted RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 BDP1A6H8Y1 2624 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 PDCD11Q14690 1871 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 TDRD15B5MCY1 1934 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 TRBV23OR9-2A0A075B6M9 112 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CYP3A7-CYP3A51PA0A087WV96 503 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 POM121BA6NF01 834 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 SMCO2A6NFE2 343 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 ATP9AO75110 1047 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CDKL5O76039 1030 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 IQCF3P0C7M6 154 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 MYCLP12524 364 aaPredicted RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 LCP1P13796 627 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 PLS3P13797 630 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CSF2RAP15509 400 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CYP3A7P24462 503 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 HOXD12P35452 270 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CD96P40200 585 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC26A2P50443 739 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 ATXN1P54253 815 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 PSMC6P62333 389 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 PFKPQ01813 784 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 ZP2Q05996 745 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 BFSP2Q13515 415 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 GPNMBQ14956 572 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 SHHQ15465 462 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 C9orf50Q5SZB4 431 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC23A3Q6PIS1 610 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 KCNK18Q7Z418 384 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 RAB11FIP4Q86YS3 637 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CCDC103Q8IW40 242 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CCDC33Q8N5R6 958 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 GTF3C6Q969F1 213 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC2A13Q96QE2 648 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 BARD1Q99728 777 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 TREX2Q9BQ50 279 aaPredicted RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CENPOQ9BU64 300 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 MAGEH1Q9H213 219 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 C6orf50Q9HD87 102 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CHST7Q9NS84 486 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 PDRG1Q9NUG6 133 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 HDAC6Q9UBN7 1215 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 MSRAQ9UJ68 235 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 ZNF215Q9UL58 517 aaPredicted RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 CITO14578 2027 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 UMODL1Q5DID0 1318 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 IGSF9BQ9UPX0 1349 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 KDM3AQ9Y4C1 1321 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 COL1A2P08123 1366 aa6.41□□□□□ -1.38
TMEM39A-212ENST00000497993 TCHHQ07283 1943 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 REV3LO60673 3130 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 GSTTP1A0A1W2PQM5 241 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 GOLGA6L3A6NEY3 463 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 FAM86B1E9PN63 330 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 F5H0A9 414 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 LARGE1O95461 756 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 FAM86B2P0C5J1 330 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ZNF286BP0CG31 522 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 HSPA7P48741 367 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 FOXO1Q12778 655 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ITGB3BPQ13352 177 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 GPR19Q15760 415 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ME3Q16798 604 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ZACNQ401N2 412 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PAN2Q504Q3 1202 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 SWSAP1Q6NVH7 229 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms