RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MTF1Q14872 753 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 CWF19L1Q69YN2 538 aaKnown RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 FAM71AQ8IYT1 594 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 SLC35F5Q8WV83 523 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 KCTD13Q8WZ19 329 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 SECISBP2LQ93073 1101 aaKnown RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 GANQ9H2C0 597 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 CCSER2Q9H7U1 834 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 NMUR1Q9HB89 426 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 ACP6Q9NPH0 428 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 THG1LQ9NWX6 298 aaKnown RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 CHORDC1Q9UHD1 332 aaPredicted RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 SIK3Q9Y2K2 1263 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 MIA3Q5JRA6 1907 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 F8VZ95 297 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 THAP12O43422 761 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 MED7O43513 233 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 TLR5O60602 858 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 S1PR4O95977 384 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ADH1BP00325 375 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 PNMA6AP0CW24 399 aaPredicted RBP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 KLK7P49862 253 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 STARD6P59095 220 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ZXDBP98169 803 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 PRKCQQ04759 706 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ADIGQ0VDE8 80 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 RAPGEF1Q13905 1077 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 SYCP1Q15431 976 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 NFKBIBQ15653 356 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 SLC44A4Q53GD3 710 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 PM20D1Q6GTS8 502 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 SCD5Q86SK9 330 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 SUGP1Q8IWZ8 645 aaKnown RBP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 SH3RF2Q8TEC5 729 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ZNF606Q8WXB4 792 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ZFYVE19Q96K21 471 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ERGIC2Q96RQ1 377 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 FAM83CQ9BQN1 747 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 ULBP1Q9BZM6 244 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 MFSD1Q9H3U5 465 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 TBC1D17Q9HA65 648 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 CBX8Q9HC52 389 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 HEBP1Q9NRV9 189 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 FAM207AQ9NSI2 230 aaPredicted RBP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
ERCC8-208ENST00000497892 OSER1Q9NX31 292 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 CLIC5Q9NZA1 410 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 NAGPAQ9UK23 515 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 CPQQ9Y646 472 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 MUC6Q6W4X9 2439 aa11.82□□□□□ -0.52
ERCC8-208ENST00000497892 A0A1W2PQH9 124 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 LEFTY2O00292 366 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 EPHB6O15197 1021 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 ZBED1O96006 694 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 MBL2P11226 248 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 CLCN1P35523 988 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 GPD2P43304 727 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 RPL34P49207 117 aaKnown RBP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 MLLT6P55198 1093 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 UBXN1Q04323 297 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 PTK2Q05397 1052 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 PDGFRLQ15198 375 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 PMF1Q6P1K2 205 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 DENND1BQ6P3S1 775 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 KLHDC10Q6PID8 442 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 TPRG1Q6ZUI0 275 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 BHLHA9Q7RTU4 235 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 LUZP1Q86V48 1076 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SLC47A2Q86VL8 602 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SIX6OS1Q8N1H7 587 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SCML4Q8N228 414 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 ARHGAP18Q8N392 663 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 ZNF276Q8N554 614 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 FLCNQ8NFG4 579 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SHDQ96IW2 340 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 NACA2Q9H009 215 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 CNGB3Q9NQW8 809 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 PIAS3Q9Y6X2 628 aa11.81□□□□□ -0.52
ERCC8-208ENST00000497892 SHISA7A6NL88 538 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 RARGP13631 454 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 GLULP15104 373 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 AOC1P19801 751 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
ERCC8-208ENST00000497892 SLC19A1P41440 591 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 RGS7P49802 495 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 CLCN5P51795 746 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms