RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 ASXL3Q9C0F0 2248 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 SMG1Q96Q15 3661 aaKnown RBP17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 NEDD8-MDP1E9PL57 170 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 CACNG3O60359 315 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 MAOBP27338 520 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 SUZ12Q15022 739 aaKnown RBP17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 E2F5Q15329 346 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 WDR72Q3MJ13 1102 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 HTR3DQ70Z44 454 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 B3GALNT2Q8NCR0 500 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 DNAJC19Q96DA6 116 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 EPSTI1Q96J88 318 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 ACOX2Q99424 681 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 B3GNT5Q9BYG0 378 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 MIR1-1HGQ9H1L0 117 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 GAREM1Q9H706 876 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 CCSER2Q9H7U1 834 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 CD248Q9HCU0 757 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 HCN2Q9UL51 889 aa17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 URB1O60287 2271 aaKnown RBP17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 MYO18AQ92614 2054 aaKnown RBP17.56■□□□□ 0.4
SUPT20H-223ENST00000497318 PCDH15Q96QU1 1955 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 HELZP42694 1942 aaKnown RBP17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 TRIM24O15164 1050 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 IRF1P10914 325 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 TYRP14679 529 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 GJB2P29033 226 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 OXTRP30559 389 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 MATKP42679 507 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 CASP5P51878 434 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 ZNF132P52740 706 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 SF3A1Q15459 793 aaKnown RBP17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 TOE1Q96GM8 510 aaKnown RBP17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 MED10Q9BTT4 135 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 PRDM16Q9HAZ2 1276 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 TM7SF3Q9NS93 570 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 PANK4Q9NVE7 773 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 LSM7Q9UK45 103 aaKnown RBP17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 PCDHGB2Q9Y5G2 931 aa17.55■□□□□ 0.4
SUPT20H-223ENST00000497318 PTPRJQ12913 1337 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 CLDN5O00501 218 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 NPC1O15118 1278 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 BCAT2O15382 392 aaPredicted RBP17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 FLRT2O43155 660 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 NCAM1P13591 858 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 TNNI1P19237 187 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 DGKGP49619 791 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 TRPC3Q13507 836 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 CBWD2Q8IUF1 395 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 SCUBE3Q8IX30 993 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 ZCCHC9Q8N567 271 aaKnown RBP17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 ENGASEQ8NFI3 743 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 SCAMP5Q8TAC9 235 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 RHBDD1Q8TEB9 315 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 ERLEC1Q96DZ1 483 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 CACNA2D2Q9NY47 1150 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 MARK1Q9P0L2 795 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
SUPT20H-223ENST00000497318 CILPO75339 1184 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 ZDHHC11BP0C7U3 371 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 DLATP10515 647 aaKnown RBP17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 CYP4F3Q08477 520 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 C19orf57Q0VDD7 668 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 TPGS1Q6ZTW0 290 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 CCDC65Q8IXS2 484 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 TNIP3Q96KP6 325 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 BBC3Q96PG8 261 aaPredicted RBP17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 KCNK16Q96T55 309 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 GPR174Q9BXC1 333 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 SLC6A17Q9H1V8 727 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 DPEP3Q9H4B8 488 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 FBXO44Q9H4M3 255 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 ITM2CQ9NQX7 267 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 IL37Q9NZH6 218 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 HSPBP1Q9NZL4 362 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 GMIPQ9P107 970 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 LOC400499M0QZD8 3231 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 ASH1LQ9NR48 2969 aaKnown RBP17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 ADAMTS9Q9P2N4 1935 aa17.53■□□□□ 0.4
SUPT20H-223ENST00000497318 A0A087WV48 116 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 TRABD2BA6NFA1 517 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 PRRT4C9JH25 899 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 TLR5O60602 858 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 CST3P01034 146 aaPredicted RBP17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 ATICP31939 592 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 SLC5A3P53794 718 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 HLA-BQ31612 363 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 USP49Q70CQ1 688 aa17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 PDCD7Q8N8D1 485 aaKnown RBP17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
SUPT20H-223ENST00000497318 SMARCD1Q96GM5 515 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms