RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CUL4BQ13620 913 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 HNRNPDQ14103 355 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 DUOXA1Q1HG43 343 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 ANO4Q32M45 955 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 BBS7Q8IWZ6 715 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 FAXDC2Q96IV6 333 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CDK5RAP1Q96SZ6 601 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 IMPG2Q9BZV3 1241 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CCSER2Q9H7U1 834 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CYP3A43Q9HB55 503 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 GMIPQ9P107 970 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 PILRBQ9UKJ0 227 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLC6A14Q9UN76 642 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CFAP47Q6ZTR5 3102 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 ASS1P00966 412 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 RDXP35241 583 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 AFMP43652 599 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 PLA2G4AP47712 749 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 KDSRQ06136 332 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 EMC10Q5UCC4 262 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 GRAMD4Q6IC98 578 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 SV2AQ7L0J3 742 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 ACOT1Q86TX2 421 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 TMEM25Q86YD3 366 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 TTC39CQ8N584 583 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 KDF1Q8NAX2 398 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 PLEKHO2Q8TD55 490 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 SMOQ99835 787 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 KLF16Q9BXK1 252 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 FAM124BQ9H5Z6 455 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 RCOR1Q9UKL0 485 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZNF510Q9Y2H8 683 aa17.79■□□□□ 0.44
TRAPPC3-207ENST00000497251 IGF2RP11717 2491 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 VNN1O95497 513 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 SERPINF2P08697 491 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 FAM200BP0CF97 657 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 CASP4P49662 377 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 NDST1P52848 882 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 ATXN3P54252 364 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 INCA1Q0VD86 236 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 MESP2Q0VG99 397 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 NFIL3Q16649 462 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 C10orf76Q5T2E6 689 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 TMEFF1Q8IYR6 380 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZMIZ2Q8NF64 920 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLC2A14Q8TDB8 520 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 RLN3Q8WXF3 142 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 KCTD10Q9H3F6 313 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 CIZ1Q9ULV3 898 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 WASF3Q9UPY6 502 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 TRAF3IP3Q9Y228 551 aa17.78■□□□□ 0.44
TRAPPC3-207ENST00000497251 PATE3B3GLJ2 98 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 H0Y626 953 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 KLRC4O43908 158 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 TRIM16O95361 564 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 F13A1P00488 732 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 NR3C1P04150 777 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 HOXB2P14652 356 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 PTGER3P43115 390 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 MAP3K7CLP57077 242 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 RPL6Q02878 288 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 GFPT1Q06210 699 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 STK4Q13043 487 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 UNQ6494/PRO21346Q6UXR6 183 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 INTS8Q75QN2 995 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 HDDC3Q8N4P3 179 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 NAT16Q8N8M0 369 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 CCDC150Q8NCX0 1101 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 GABRG3Q99928 467 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 BBS2Q9BXC9 721 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 NT5C1AQ9BXI3 368 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 SDCBP2Q9H190 292 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 DNAJC17Q9NVM6 304 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 DNMT3LQ9UJW3 386 aa17.77■□□□□ 0.44
TRAPPC3-207ENST00000497251 A0A1W2PQD8 194 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SCAMP3O14828 347 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 GREM1O60565 184 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SYPP08247 313 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 TYRP14679 529 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 ENGP17813 658 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 GABRG2P18507 467 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 CMA1P23946 247 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 RPL13P26373 211 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 ASPAP45381 313 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SEMA3BQ13214 749 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SLC14A1Q13336 389 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SCARA5Q6ZMJ2 495 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 METTL3Q86U44 580 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 SFTPA1Q8IWL2 248 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 CHPFQ8IZ52 775 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
TRAPPC3-207ENST00000497251 FOXJ1Q92949 421 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms