RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 METTL12A8MUP2 240 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 DEXIO95424 95 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 PFKLP17858 780 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 OXTRP30559 389 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 MATR3P43243 847 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 ACADVLP49748 655 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 GUCY2FP51841 1108 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 ANAPC15P60006 121 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 STARD3Q14849 445 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 NPY5RQ15761 445 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 NFE2Q16621 373 aaPredicted RBP10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 DDR2Q16832 855 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 FBXL19Q6PCT2 694 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 RHBDF2Q6PJF5 856 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 Q6ZUG5 572 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 ADAT2Q7Z6V5 191 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 NAT16Q8N8M0 369 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 GABRG3Q99928 467 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 DPH1Q9BZG8 443 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 BRINP2Q9C0B6 783 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 TUFT1Q9NNX1 390 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
SMARCAL1-213ENST00000496037 KNTC1P50748 2209 aa10.27□□□□□ -0.76
SMARCAL1-213ENST00000496037 H0Y8X5 98 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 ABLIM1O14639 778 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 KCNK3O14649 394 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 PPEF2O14830 753 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 TULP3O75386 442 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 TOM1L1O75674 476 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 TXKP42681 527 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 GRIA4P48058 902 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 PEX3P56589 373 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZXDBP98169 803 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 NFKB2Q00653 900 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 STRN3Q13033 797 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 ADCK5Q3MIX3 580 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 LY6G5CQ5SRR4 150 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 DDX42Q86XP3 938 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 ETFBKMTQ8IXQ9 262 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 LSMEM2Q8N112 164 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 SCFD1Q8WVM8 642 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 HIC2Q96JB3 615 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 ACOX2Q99424 681 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 PYM1Q9BRP8 204 aaKnown RBP10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 CD248Q9HCU0 757 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 POLD4Q9HCU8 107 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 SMPD4Q9NXE4 827 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 USP36Q9P275 1121 aaKnown RBP10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 CFAP97Q9P2B7 532 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 TBC1D14Q9P2M4 693 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 STARD13Q9Y3M8 1113 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 CPQQ9Y646 472 aa10.27□□□□□ -0.77
SMARCAL1-213ENST00000496037 DOPEY1Q5JWR5 2465 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 TTC26A0AVF1 554 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CBX4O00257 560 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CYB561D2O14569 222 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 PAPSS1O43252 624 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 DFNA5O60443 496 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CLTAP09496 248 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 SPATA31C1P0DKV0 1188 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ABCB4P21439 1286 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 NPTX2P47972 431 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 SLC7A9P82251 487 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ILKQ13418 452 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZBTB6Q15916 424 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ANO4Q32M45 955 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 GRAMD4Q6IC98 578 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 LEO1Q8WVC0 666 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 TSC1Q92574 1164 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZBTB45Q96K62 511 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 KMT5AQ9NQR1 393 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 TRPM5Q9NZQ8 1165 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 KCNJ14Q9UNX9 436 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 ABCA12Q86UK0 2595 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 CREBBPQ92793 2442 aa10.26□□□□□ -0.77
SMARCAL1-213ENST00000496037 HMGB1P1B2RPK0 211 aaPredicted RBP10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 K7ENP7 123 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 CPLX1O14810 134 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 CLDN3O15551 220 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 HOXC11O43248 304 aaPredicted RBP10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 SUV39H1O43463 412 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 NEMFO60524 1076 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 MED24O75448 989 aa10.25□□□□□ -0.77
SMARCAL1-213ENST00000496037 IGHDP01880 384 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms