RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PIK3R2O00459 728 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 SLC9A3R1O14745 358 aaPredicted RBP11.17□□□□□ -0.62
NELFE-213ENST00000494956 DCLK1O15075 740 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
NELFE-213ENST00000494956 TGM1P22735 817 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 TIE1P35590 1138 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
NELFE-213ENST00000494956 TKTL1P51854 596 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 UBE2HP62256 183 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 APBA1Q02410 837 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 SPEM2Q0P670 501 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 DMC1Q14565 340 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 CCDC6Q16204 474 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 ANO4Q32M45 955 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 SGO2Q562F6 1265 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 C10orf120Q5SQS8 335 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 WDR5BQ86VZ2 330 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 PPM1KQ8N3J5 372 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 RMDN1Q96DB5 314 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 NT5C1BQ96P26 610 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 METTL14Q9HCE5 456 aaKnown RBP11.17□□□□□ -0.62
NELFE-213ENST00000494956 PNPLA8Q9NP80 782 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 TBC1D14Q9P2M4 693 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 RASAL2Q9UJF2 1139 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 SPAG17Q6Q759 2223 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 FRYLO94915 3013 aa11.17□□□□□ -0.62
NELFE-213ENST00000494956 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 ATG13O75143 517 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 TULP3O75386 442 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 GABBR2O75899 941 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 STC2O76061 302 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 KAT7O95251 611 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 KLF8O95600 359 aaPredicted RBP11.16□□□□□ -0.62
NELFE-213ENST00000494956 ADH1CP00326 375 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 KLKB1P03952 638 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
NELFE-213ENST00000494956 RGS7P49802 495 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 GAD2Q05329 585 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 EFEMP1Q12805 493 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 FBXO43Q4G163 708 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 RAB41Q5JT25 222 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 GJB7Q6PEY0 223 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 CEP68Q76N32 757 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 KBTBD6Q86V97 674 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 TRIM59Q8IWR1 403 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 ETFBKMTQ8IXQ9 262 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
NELFE-213ENST00000494956 ALLCQ8N6M5 410 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 PNKPQ96T60 521 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 GTPBP4Q9BZE4 634 aaKnown RBP11.16□□□□□ -0.62
NELFE-213ENST00000494956 TPSD1Q9BZJ3 242 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 ARHGEF4Q9NR80 690 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 PLK2Q9NYY3 685 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 DNMT3LQ9UJW3 386 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 HCN2Q9UL51 889 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 USP18Q9UMW8 372 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
NELFE-213ENST00000494956 ABCA7Q8IZY2 2146 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 NEDD8-MDP1E9PL57 170 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 SGK1O00141 431 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 O00370 1275 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 AXIN1O15169 862 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 APODP05090 189 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 VDRP11473 427 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 HOXA6P31267 233 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 PPP1R2P41236 205 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 WASP42768 502 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 ID4P47928 161 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 BCAT1P54687 386 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 YWHAGP61981 247 aaKnown RBP eCLIP11.15□□□□□ -0.62
NELFE-213ENST00000494956 ADIGQ0VDE8 80 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 Q6ZNB5 142 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 SYT13Q7L8C5 426 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 IL17RCQ8NAC3 791 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 TXNDC5Q8NBS9 432 aaKnown RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 EDEM1Q92611 657 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms