RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, human

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKP4-215	ENST00000494945	NGRN	Q9NPE2	291 aa	Known RBP	11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	ABCC13	Q9NSE7	274 aa		11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	TMEM51	Q9NW97	253 aa		11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	USP18	Q9UMW8	372 aa		11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	PDE4DIP	Q5VU43	2346 aa		11.52	□□□□□ -0.57
PKP4-215	ENST00000494945	SLC38A8	A6NNN8	435 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	EFCAB8	A8MWE9	144 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	GRXCR1	A8MXD5	290 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TEX28	O15482	410 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	SEC24A	O95486	1093 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	CXCL14	O95715	111 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	C1R	P00736	705 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	F9	P00740	461 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	KRT1	P04264	644 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ADH1A	P07327	375 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	CNP	P09543	421 aa	Known RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	PYGM	P11217	842 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	NCAM1	P13591	858 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TCF4	P15884	667 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ATF6	P18850	670 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ELF1	P32519	619 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	RDX	P35241	583 aa	Known RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ALDH1A3	P47895	512 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	HDAC4	P56524	1084 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	IFRD2	Q12894	506 aa	Predicted RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ZNF211	Q13398	564 aa	Predicted RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	BOLA3	Q53S33	107 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	SH3PXD2A	Q5TCZ1	1133 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	SDHAF4	Q5VUM1	108 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	SYPL2	Q5VXT5	272 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	BTBD8	Q5XKL5	378 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	MAIP1	Q8WWC4	291 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	AUTS2	Q8WXX7	1259 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	PGAP3	Q96FM1	320 aa	Predicted RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TGS1	Q96RS0	853 aa	Known RBP	11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	GDF15	Q99988	308 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TCF25	Q9BQ70	676 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	C17orf80	Q9BSJ5	609 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TTLL2	Q9BWV7	592 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	CYP4F11	Q9HBI6	524 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	ENTPD7	Q9NQZ7	604 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	TLR9	Q9NR96	1032 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	NAALADL1	Q9UQQ1	740 aa		11.51	□□□□□ -0.57
PKP4-215	ENST00000494945	CHD5	Q8TDI0	1954 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CCDC188	H7C350	402 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945		M0QYT0	321 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PRRG1	O14668	218 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	FSCN2	O14926	492 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	MDM4	O15151	490 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	LPXN	O60711	386 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	TADA3	O75528	432 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	SOAT2	O75908	522 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	FGG	P02679	453 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CA3	P07451	260 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CSH1	P0DML2	217 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CSH2	P0DML3	217 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	MYOG	P15173	224 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	IL1R2	P27930	398 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CA8	P35219	290 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PTPN7	P35236	360 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	GJC1	P36383	396 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	AIF1	P55008	147 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ERVFC1	P60507	584 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ERVK-21	P61565	698 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	USP46	P62068	366 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	DEUP1	Q05D60	604 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PLD1	Q13393	1074 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	VEPH1	Q14D04	833 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	RAB30	Q15771	203 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ZFYVE27	Q5T4F4	411 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	OTUD1	Q5VV17	481 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	TXNRD3NB	Q6F5E7	133 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PDE12	Q6L8Q7	609 aa	Known RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	SCD5	Q86SK9	330 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	VSIG1	Q86XK7	387 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PSTK	Q8IV42	348 aa	Known RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CCDC50	Q8IVM0	306 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PDZD8	Q8NEN9	1154 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	SPATA4	Q8NEY3	305 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CMAS	Q8NFW8	434 aa	Predicted RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	POF1B	Q8WVV4	589 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	OVCA2	Q8WZ82	227 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	FBXO32	Q969P5	355 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	KLHL5	Q96PQ7	755 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	SLITRK1	Q96PX8	696 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PEBP4	Q96S96	227 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ZWILCH	Q9H900	591 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	ALG13	Q9NP73	1137 aa	Known RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	TLR8	Q9NR97	1041 aa	Known RBP	11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	CLIC5	Q9NZA1	410 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	PCSK1N	Q9UHG2	260 aa		11.5	□□□□□ -0.57
PKP4-215	ENST00000494945	YIPF1	Q9Y548	306 aa		11.5	□□□□□ -0.57

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