RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 PM20D1Q6GTS8 502 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 GPRIN1Q7Z2K8 1008 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 BNIPLQ7Z465 357 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 RFX6Q8HWS3 928 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 LRRC43Q8N309 656 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 NKD2Q969F2 451 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-245ENST00000494862 NT5C3BQ969T7 300 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 GDAP1L1Q96MZ0 367 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 KCNK16Q96T55 309 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 NPY6RQ99463 290 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 SNRNP25Q9BV90 132 aaKnown RBP11.99□□□□□ -0.49
HDLBP-245ENST00000494862 MAK16Q9BXY0 300 aaKnown RBP11.99□□□□□ -0.49
HDLBP-245ENST00000494862 NEUROG2Q9H2A3 272 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 POPDC2Q9HBU9 364 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 PCDH18Q9HCL0 1135 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDLBP-245ENST00000494862 MARCH5Q9NX47 278 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 RRN3Q9NYV6 651 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 FAM153AQ9UHL3 310 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 HPCAL4Q9UM19 191 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 NEU2Q9Y3R4 380 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 TSC2P49815 1807 aa11.99□□□□□ -0.49
HDLBP-245ENST00000494862 TANC1Q9C0D5 1861 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.495e-6■■■■■ 68.9
HDLBP-245ENST00000494862 CD48P09326 243 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 USP17L7P0C7H9 530 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 FGFR3P22607 806 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 RDXP35241 583 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 HSPA9P38646 679 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 RGS19P49795 217 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 RABGGTBP53611 331 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 VCPP55072 806 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 DPYSL3Q14195 570 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ERMARDQ5T6L9 678 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ZNF280DQ6N043 979 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ZDHHC24Q6UX98 284 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 PSTKQ8IV42 348 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 SLC35B2Q8TB61 432 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 LRRC45Q96CN5 670 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 FUBP3Q96I24 572 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
HDLBP-245ENST00000494862 CCDC114Q96M63 670 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 RNF157Q96PX1 679 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 RHOBTB2Q9BYZ6 727 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ZDHHC18Q9NUE0 388 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 WHRNQ9P202 907 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 DNPEPQ9ULA0 475 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 USP3Q9Y6I4 520 aa11.98□□□□□ -0.49
HDLBP-245ENST00000494862 ABHD14A-ACY1A0A1B0GW23 586 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 YJEFN3A6XGL0 299 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 E7ENQ6 273 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 H7C4K7 107 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CAPN9O14815 690 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 APOC2P02655 101 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 LTFP02788 710 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ITGAVP06756 1048 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CDR1P51861 262 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ATXN1P54253 815 aaKnown RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 DYNLT1P63172 113 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 OTUD4Q01804 1114 aaKnown RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 MMRN1Q13201 1228 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 OASLQ15646 514 aaKnown RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 DPYSL2Q16555 572 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CA9Q16790 459 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 LRRC26Q2I0M4 334 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CTXN3Q4LDR2 81 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ZC3H12AQ5D1E8 599 aaKnown RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 OTUD1Q5VV17 481 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 FUT10Q6P4F1 479 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 HFE2Q6ZVN8 426 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 BEND5Q7L4P6 421 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ALLCQ8N6M5 410 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CCDC89Q8N998 374 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 TSEN2Q8NCE0 465 aaKnown RBP11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ACTL9Q8TC94 416 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CCHCR1Q8TD31 782 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 FAF2Q96CS3 445 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 FMO2Q99518 471 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 FAM118BQ9BPY3 351 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 TRIM62Q9BVG3 475 aa11.97□□□□□ -0.49
HDLBP-245ENST00000494862 CALN1Q9BXU9 219 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms