RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 NRP1O14786 923 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 RBP3P10745 1247 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 ODC1P11926 461 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 SKIP12755 728 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 RPL22P35268 128 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 MAP2K2P36507 400 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 VEGFBP49765 207 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 ATP1A2P50993 1020 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 MAP3K7CLP57077 242 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 IFFO1Q0D2I5 559 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 TFDP2Q14188 446 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 KRT81Q14533 505 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 MORF4L2Q15014 288 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 SLC25A52Q3SY17 297 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 PAN2Q504Q3 1202 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 RAB41Q5JT25 222 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 ERMARDQ5T6L9 678 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 UHMK1Q8TAS1 419 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 EPS8L3Q8TE67 593 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 NPY6RQ99463 290 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 MED10Q9BTT4 135 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 RHOBTB2Q9BYZ6 727 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 UBN1Q9NPG3 1134 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 PHF24Q9UPV7 400 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 SHOC2Q9UQ13 582 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 INPP5FQ9Y2H2 1132 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 PTCH2Q9Y6C5 1203 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 USP3Q9Y6I4 520 aa11.07□□□□□ -0.64
PRPF4B-209ENST00000494674 MCF2LO15068 1137 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 AP1G2O75843 785 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 B3GAT3O94766 335 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ACSL3O95573 720 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 IFNB1P01574 187 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 TGM2P21980 687 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 IRAK1P51617 712 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 TKTL1P51854 596 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 NRLP54845 237 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 DAOAP59103 153 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 YWHAZP63104 245 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 FAM189BP81408 668 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 DSC1Q08554 894 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 GPNMBQ14956 572 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 KYNUQ16719 465 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 SYPL2Q5VXT5 272 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 MFSD5Q6N075 450 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 MAP7D3Q8IWC1 876 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 FAM71DQ8N9W8 422 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 OR10T2Q8NGX3 314 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 HASPINQ8TF76 798 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 CPT1BQ92523 772 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 MYLPFQ96A32 169 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 UROC1Q96N76 676 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 RBM15Q96T37 977 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 KCNK16Q96T55 309 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 CAPS2Q9BXY5 557 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ULBP1Q9BZM6 244 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 USP29Q9HBJ7 922 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 CSNK1G1Q9HCP0 422 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 HMX1Q9NP08 348 aaPredicted RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 TMLHEQ9NVH6 421 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 NOVA2Q9UNW9 492 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 AP4E1Q9UPM8 1137 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 PLXNA3P51805 1871 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ARVCFO00192 962 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 CYP2F1P24903 491 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 PCSK1P29120 753 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ACTN2P35609 894 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 SULT1E1P49888 294 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 TTC3P53804 2025 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 SLC8A3P57103 927 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 MAGOHP61326 146 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 GAD2Q05329 585 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 AUHQ13825 339 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 INTS6LQ5JSJ4 861 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 LRRC31Q6UY01 552 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 CTU1Q7Z7A3 348 aaKnown RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 NAT8LQ8N9F0 302 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ZNF296Q8WUU4 475 aaPredicted RBP11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 P3H4Q92791 437 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 RTP4Q96DX8 246 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 SUSD3Q96L08 255 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 ACBD6Q9BR61 282 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 LRRC4Q9HBW1 653 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 STARD7Q9NQZ5 370 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 FZD10Q9ULW2 581 aa11.06□□□□□ -0.64
PRPF4B-209ENST00000494674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
PRPF4B-209ENST00000494674 ERICH4A6NGS2 130 aa11.05□□□□□ -0.64
PRPF4B-209ENST00000494674 YJEFN3A6XGL0 299 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms