RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 PRR23BQ6ZRT6 265 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 TTC30AQ86WT1 665 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 SFTPA1Q8IWL2 248 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 UBA3Q8TBC4 463 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 USP33Q8TEY7 942 aa16.42■□□□□ 0.22
LIMS2-216ENST00000494613 SECISBP2LQ93073 1101 aaKnown RBP16.42■□□□□ 0.22
LIMS2-216ENST00000494613 ZNF292O60281 2723 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 CCDC163A0A0D9SF12 145 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 TULP2O00295 520 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 RALAP11233 206 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 CD19P15391 556 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 TGM1P22735 817 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
LIMS2-216ENST00000494613 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
LIMS2-216ENST00000494613 PDE4CQ08493 712 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 DMC1Q14565 340 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 PM20D1Q6GTS8 502 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
LIMS2-216ENST00000494613 NT5C1BQ96P26 610 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 CLIC5Q9NZA1 410 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
LIMS2-216ENST00000494613 GPR179Q6PRD1 2367 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 KAT7O95251 611 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 FGFR1OPO95684 399 aaKnown RBP16.4■□□□□ 0.22
LIMS2-216ENST00000494613 ZBED1O96006 694 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 APODP05090 189 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 GRIA2P42262 883 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 TNFRSF4P43489 277 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 ID4P47928 161 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 TKTL1P51854 596 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 MRPS21P82921 87 aaKnown RBP16.4■□□□□ 0.22
LIMS2-216ENST00000494613 GOLGA7BQ2TAP0 167 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 ANO4Q32M45 955 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 BTBD8Q5XKL5 378 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 LAIR1Q6GTX8 287 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 CEP68Q76N32 757 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 TADA2BQ86TJ2 420 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 GPR161Q8N6U8 529 aaKnown RBP16.4■□□□□ 0.22
LIMS2-216ENST00000494613 TFAP2BQ92481 460 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 KAT5Q92993 513 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 HHIPQ96QV1 700 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 MED15Q96RN5 788 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 HESX1Q9UBX0 185 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 RWDD2AQ9UIY3 292 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIMS2-216ENST00000494613 MYOFQ9NZM1 2061 aa16.4■□□□□ 0.22
LIMS2-216ENST00000494613 HELZP42694 1942 aaKnown RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 OTOGLQ3ZCN5 2332 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 TBC1D3BA6NDS4 549 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 HOXC11O43248 304 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 KLKB1P03952 638 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 RETP07949 1114 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 PAEPP09466 180 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 TIE1P35590 1138 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 COG7P83436 770 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 GOLGA8FQ08AF8 430 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 GOLGA8DPQ0D2H9 430 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 CNGA2Q16280 664 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 PKDCCQ504Y2 493 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 LCLAT1Q6UWP7 414 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 TPGS1Q6ZTW0 290 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 MIB1Q86YT6 1006 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 CREBRFQ8IUR6 639 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 ETFBKMTQ8IXQ9 262 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 ARHGAP18Q8N392 663 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 ACDQ96AP0 544 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 CDK5RAP1Q96SZ6 601 aaKnown RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 DEC1Q9P2X7 70 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 LSM7Q9UK45 103 aaKnown RBP16.39■□□□□ 0.21
LIMS2-216ENST00000494613 GMEB2Q9UKD1 530 aa16.39■□□□□ 0.21
LIMS2-216ENST00000494613 GVINP1Q7Z2Y8 2422 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-216ENST00000494613 O00370 1275 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 TRIM24O15164 1050 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 AXIN1O15169 862 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 TULP3O75386 442 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 STC2O76061 302 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 CALCAP01258 141 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 KIR2DL1P43626 348 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-216ENST00000494613 BCAT1P54687 386 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 YWHAGP61981 247 aaKnown RBP eCLIP16.38■□□□□ 0.21
LIMS2-216ENST00000494613 SPEM2Q0P670 501 aa16.38■□□□□ 0.21
LIMS2-216ENST00000494613 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
LIMS2-216ENST00000494613 EFEMP1Q12805 493 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms