RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 BPIFB1Q8TDL5 484 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 EZH1Q92800 747 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 MYLPFQ96A32 169 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 HPDLQ96IR7 371 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 NELL2Q99435 816 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 SYT15Q9BQS2 421 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ACBD6Q9BR61 282 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 DPEP3Q9H4B8 488 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 CHCHD3Q9NX63 227 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 SMG5Q9UPR3 1016 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 MYO18AQ92614 2054 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ACACBO00763 2458 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 LAMA1P25391 3075 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 GOLGA6L10A6NI86 522 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 ZNF233A6NK53 670 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CLDN5O00501 218 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 DPYSL4O14531 572 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 NDUFAB1O14561 156 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SCAMP3O14828 347 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 EIF3DO15371 548 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 HRO43593 1189 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 RASSF9O75901 435 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SERPINC1P01008 464 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 MYBL2P10244 700 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 DLATP10515 647 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 BDNFP23560 247 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CDC25CP30307 473 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PNPLA4P41247 253 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 ID4P47928 161 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PXNP49023 591 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 UBASH3AP57075 661 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 MYL6P60660 151 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 STK4Q13043 487 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CCINQ13939 588 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 NAA25Q14CX7 972 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 VEPH1Q14D04 833 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PSMD6Q15008 389 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SNRNP35Q16560 246 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 ARHGAP15Q53QZ3 475 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 TLDC1Q6P9B6 456 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 UNC13DQ70J99 1090 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 MON1AQ86VX9 555 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 TOP6BLQ8N6T0 577 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 KIAA0895Q8NCT3 520 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 MIPOL1Q8TD10 442 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CSGALNACT1Q8TDX6 532 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 COG1Q8WTW3 980 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CCDC127Q96BQ5 260 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 ANKRD36BP1Q96IX9 119 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 CGRRF1Q99675 332 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SDCBP2Q9H190 292 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 EPC1Q9H2F5 836 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SEMA4AQ9H3S1 761 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 EBF3Q9H4W6 596 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 TMEM206Q9H813 350 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 OBP2AQ9NY56 170 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 GCNT4Q9P109 453 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 HPCAL4Q9UM19 191 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 MRPS17Q9Y2R5 130 aaKnown RBP8.63□□□□□ -1.03
HDAC6-234ENST00000493923 PCDHGA2Q9Y5H1 932 aa8.63□□□□□ -1.03
HDAC6-234ENST00000493923 A0A1B0GVL5 298 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 MED19A0JLT2 244 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-234ENST00000493923 PDLIM1O00151 329 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 NCAM2O15394 837 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 VNN1O95497 513 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 SYF2O95926 243 aaKnown RBP8.62□□□□□ -1.03
HDAC6-234ENST00000493923 EGFP01133 1207 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 FESP07332 822 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 CSH1P0DML2 217 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 CSH2P0DML3 217 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 WARSP23381 471 aaKnown RBP8.62□□□□□ -1.03
HDAC6-234ENST00000493923 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 ME1P48163 572 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 PGFP49763 221 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 CDH8P55286 799 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 GNGT1P63211 74 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 DLG4P78352 724 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 MYL7Q01449 175 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 MYL5Q02045 173 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 MESP2Q0VG99 397 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 ZNF77Q15935 545 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 TAF12Q16514 161 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 NFE2Q16621 373 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-234ENST00000493923 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 BMT2Q1RMZ1 405 aa8.62□□□□□ -1.03
HDAC6-234ENST00000493923 GAB4Q2WGN9 574 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms