RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CD101Q93033 1021 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 TUBGCP2Q9BSJ2 902 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 ULBP1Q9BZM6 244 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 NDST4Q9H3R1 872 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 LRRC4Q9HBW1 653 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 KCNJ18B7U540 433 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 M0QYV0 167 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 SCAMP3O14828 347 aaKnown RBP23.77■■□□□ 1.4
SNIP1-203ENST00000493916 GREM1O60565 184 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 PAPSS2O95340 614 aaPredicted RBP23.77■■□□□ 1.4
SNIP1-203ENST00000493916 ADH1CP00326 375 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 TDGF1P13385 188 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 KRT5P13647 590 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 PRKCSHP14314 528 aaPredicted RBP23.77■■□□□ 1.4
SNIP1-203ENST00000493916 YWHAGP61981 247 aaKnown RBP eCLIP23.77■■□□□ 1.4
SNIP1-203ENST00000493916 ADIGQ0VDE8 80 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 KCNJ12Q14500 433 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 PPP2R5DQ14738 602 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 CCDC183Q5T5S1 534 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 NAIF1Q69YI7 327 aaPredicted RBP23.77■■□□□ 1.4
SNIP1-203ENST00000493916 HTR3DQ70Z44 454 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 BHLHA9Q7RTU4 235 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 SCML4Q8N228 414 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 SLC35F5Q8WV83 523 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 NELL1Q92832 810 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 NFE2L3Q9Y4A8 694 aa23.77■■□□□ 1.4
SNIP1-203ENST00000493916 EGFP01133 1207 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 IRF1P10914 325 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 EEF1GP26641 437 aaKnown RBP23.76■■□□□ 1.39
SNIP1-203ENST00000493916 MEA1Q16626 185 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 FBXO43Q4G163 708 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 HSP90AA4PQ58FG1 418 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 TCP11X2Q5H9J9 407 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 GJB7Q6PEY0 223 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 RHBDF2Q6PJF5 856 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 BBS7Q8IWZ6 715 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 SIX6OS1Q8N1H7 587 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 SECISBP2LQ93073 1101 aaKnown RBP23.76■■□□□ 1.39
SNIP1-203ENST00000493916 WBP2Q969T9 261 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 FAM126AQ9BYI3 521 aaPredicted RBP23.76■■□□□ 1.39
SNIP1-203ENST00000493916 SEMA4AQ9H3S1 761 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 FBRSL1Q9HCM7 1045 aaKnown RBP23.76■■□□□ 1.39
SNIP1-203ENST00000493916 SIX2Q9NPC8 291 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 CNGB3Q9NQW8 809 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 SAMSN1Q9NSI8 373 aaKnown RBP23.76■■□□□ 1.39
SNIP1-203ENST00000493916 CACNA1IQ9P0X4 2223 aa23.76■■□□□ 1.39
SNIP1-203ENST00000493916 MDM4O15151 490 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 CALCAP01258 141 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 OPRD1P41143 372 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 EIF2DP41214 584 aaKnown RBP23.75■■□□□ 1.39
SNIP1-203ENST00000493916 CXCL12P48061 93 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 SATB1Q01826 763 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 APBA1Q02410 837 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 SASS6Q6UVJ0 657 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 SHC3Q92529 594 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 ANO10Q9NW15 660 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 LSM7Q9UK45 103 aaKnown RBP23.75■■□□□ 1.39
SNIP1-203ENST00000493916 NUDT5Q9UKK9 219 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 PCDHGA2Q9Y5H1 932 aa23.75■■□□□ 1.39
SNIP1-203ENST00000493916 ADH5P11766 374 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 STX1AQ16623 288 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 CDKAL1Q5VV42 579 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 PMF1Q6P1K2 205 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 NKD2Q969F2 451 aaPredicted RBP23.74■■□□□ 1.39
SNIP1-203ENST00000493916 HSFY1Q96LI6 401 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 ZSCAN32Q9NX65 697 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 R4GN57 208 aa23.74■■□□□ 1.39
SNIP1-203ENST00000493916 FANCMQ8IYD8 2048 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 BECN2A8MW95 431 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 HOXC11O43248 304 aaPredicted RBP23.73■■□□□ 1.39
SNIP1-203ENST00000493916 MED7O43513 233 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 NRLP54845 237 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 LY6G5CQ5SRR4 150 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 TSSK4Q6SA08 328 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 Q6ZNB5 142 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 RSRC2Q7L4I2 434 aaKnown RBP23.73■■□□□ 1.39
SNIP1-203ENST00000493916 MIB1Q86YT6 1006 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 ZBTB44Q8NCP5 570 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 EZH1Q92800 747 aaPredicted RBP23.73■■□□□ 1.39
SNIP1-203ENST00000493916 SPHK2Q9NRA0 654 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 RASAL2Q9UJF2 1139 aa23.73■■□□□ 1.39
SNIP1-203ENST00000493916 PRR23AA6NEV1 266 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 CHURC1-FNTBB4DL54 471 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 ATG13O75143 517 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 RNF40O75150 1001 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 GABBR2O75899 941 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 STC2O76061 302 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 LCP1P13796 627 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 GNA15P30679 374 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 RPL34P49207 117 aaKnown RBP23.72■■□□□ 1.39
SNIP1-203ENST00000493916 RGS7P49802 495 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 DAOAP59103 153 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 COG7P83436 770 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 GAD2Q05329 585 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 EFEMP1Q12805 493 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 ARHGAP44Q17R89 818 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 DPY19L2P1Q6NXN4 242 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 C11orf57Q6ZUT1 292 aaPredicted RBP23.72■■□□□ 1.39
SNIP1-203ENST00000493916 CCDC26Q8TAB7 109 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 IRGQQ8WZA9 623 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms