RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 EEF1GP26641 437 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 GNL1P36915 607 aaPredicted RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 MAGEA11P43364 429 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 ASPAP45381 313 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 TUFMP49411 452 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 MXI1P50539 228 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 EPHA5P54756 1037 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 UBAP2LQ14157 1087 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 IQCB1Q15051 598 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 MAPRE1Q15691 268 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 NFE2Q16621 373 aaPredicted RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 STX1AQ16623 288 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 ZNF667Q5HYK9 610 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 MIIPQ5JXC2 388 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 ELMSAN1Q6PJG2 1045 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SASS6Q6UVJ0 657 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 APTXQ7Z2E3 356 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 PALB2Q86YC2 1186 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 GALNT12Q8IXK2 581 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 DCP1BQ8IZD4 617 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 ADGRF2Q8IZF7 708 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 TTC39CQ8N584 583 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SPPL2BQ8TCT7 592 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 WHAMMQ8TF30 809 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 LRRC3Q9BY71 257 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SDCBP2Q9H190 292 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 WDR6Q9NNW5 1121 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 CEP72Q9P209 647 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SMG5Q9UPR3 1016 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 R3HCC1Q9Y3T6 440 aaKnown RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 ASB3Q9Y575 518 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS52-219ENST00000493379 RALGAPA1Q6GYQ0 2036 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 UBR5O95071 2799 aaPredicted RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 CCDC195A0A1B0GUA6 201 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 ST8SIA5O15466 376 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 CILPO75339 1184 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 SASH3O75995 380 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 AFPP02771 609 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 DCNP07585 359 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 HAPLN1P10915 354 aaPredicted RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 P4HA1P13674 534 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 PTPN1P18031 435 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 CES1P23141 567 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MTHFRP42898 656 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 NOP14P78316 857 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 MYL7Q01449 175 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 GCNT1Q02742 428 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 PTSQ03393 145 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 ADCY1Q08828 1119 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 BIRC3Q13489 604 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MAN2A1Q16706 1144 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 COL28A1Q2UY09 1125 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 ZNF699Q32M78 642 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 CCDC40Q4G0X9 1142 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 TCP11X2Q5H9J9 407 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 ATAT1Q5SQI0 421 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 TTC39BQ5VTQ0 682 aaPredicted RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 CAVIN1Q6NZI2 390 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 RIPOR1Q6ZS17 1223 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 C11orf57Q6ZUT1 292 aaPredicted RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 PAQR9Q6ZVX9 377 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 FAM114A1Q8IWE2 563 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MYCBPAPQ8TBZ2 947 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 GATA6Q92908 595 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 PMEPA1Q969W9 287 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 FAM81BQ96LP2 452 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MRPL45Q9BRJ2 306 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 GSX2Q9BZM3 304 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 CSNK1G1Q9HCP0 422 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 CRTAC1Q9NQ79 661 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 MAN1C1Q9NR34 630 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 SAMSN1Q9NSI8 373 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 TMLHEQ9NVH6 421 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 IL37Q9NZH6 218 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 LIMA1Q9UHB6 759 aaKnown RBP7.16□□□□□ -1.26
VPS52-219ENST00000493379 NFE2L3Q9Y4A8 694 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 PCDHGC4Q9Y5F7 938 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
VPS52-219ENST00000493379 FAM92AA1XBS5 289 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 MYBPHLA2RUH7 354 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 SLC35F4A4IF30 521 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 RFPL2O75678 378 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 C8AP07357 584 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 OR4Q2P0C623 313 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 ACO1P21399 889 aaKnown RBP7.15□□□□□ -1.26
VPS52-219ENST00000493379 TBXAS1P24557 533 aaPredicted RBP7.15□□□□□ -1.26
VPS52-219ENST00000493379 CDH8P55286 799 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 TNNC1P63316 161 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 MYL5Q02045 173 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 SRSF1Q07955 248 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS52-219ENST00000493379 KCNMA1Q12791 1236 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 CETN1Q12798 172 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 DUSP4Q13115 394 aa7.15□□□□□ -1.26
VPS52-219ENST00000493379 CCINQ13939 588 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms