RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 APODP05090 189 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 RALAP11233 206 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 VDRP11473 427 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 HOXC13P31276 330 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 SLC6A11P48066 632 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 LMNB2Q03252 620 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 CETN1Q12798 172 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 BTBD8Q5XKL5 378 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 PM20D1Q6GTS8 502 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 CEP68Q76N32 757 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 CACNA2D4Q7Z3S7 1137 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 PIGZQ86VD9 579 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 ETFBKMTQ8IXQ9 262 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 UBR7Q8N806 425 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 TRIML1Q8N9V2 468 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 WBP2Q969T9 261 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 JAKMIP2Q96AA8 810 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 ZC3H10Q96K80 434 aaKnown RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 DLL3Q9NYJ7 618 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 XPO1O14980 1071 aaKnown RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 FGFR1OPO95684 399 aaKnown RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 PXNP49023 591 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 UBE2HP62256 183 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 COG7P83436 770 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 LPAL2Q16609 132 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 CCDC40Q4G0X9 1142 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 SGO2Q562F6 1265 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 C2orf27AQ580R0 203 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 C10orf120Q5SQS8 335 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 KLHL10Q6JEL2 608 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 TMEM25Q86YD3 366 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 PHTF2Q8N3S3 785 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 FAM160A2Q8N612 972 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-202ENST00000493075 LMO3Q8TAP4 145 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 RMDN1Q96DB5 314 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 NT5C1BQ96P26 610 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 CHMP5Q9NZZ3 219 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 MARK1Q9P0L2 795 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 DEC1Q9P2X7 70 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 OBSL1O75147 1896 aa12.09□□□□□ -0.47
LRTM1-202ENST00000493075 GVINP1Q7Z2Y8 2422 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 TULP3O75386 442 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 PAEPP09466 180 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 IRF1P10914 325 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
LRTM1-202ENST00000493075 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
LRTM1-202ENST00000493075 DGKEP52429 567 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 BCAT1P54687 386 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 PAK1Q13153 545 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 CRY1Q16526 586 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 CSRP2Q16527 193 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 Q6ZNB5 142 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 C11orf74Q86VG3 221 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 C12orf40Q86WS4 652 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 TRIM59Q8IWR1 403 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 EHBP1Q8NDI1 1231 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
LRTM1-202ENST00000493075 HHIPQ96QV1 700 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 PARD6AQ9NPB6 346 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 POLR3BQ9NW08 1133 aaPredicted RBP12.08□□□□□ -0.48
LRTM1-202ENST00000493075 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 TSPAN16Q9UKR8 245 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 USP18Q9UMW8 372 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
LRTM1-202ENST00000493075 ANAPC1Q9H1A4 1944 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 OTOGLQ3ZCN5 2332 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 GPR179Q6PRD1 2367 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 TBC1D3BA6NDS4 549 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 BIN1O00499 593 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 STC2O76061 302 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 ZBED1O96006 694 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 SETSIPP0DME0 302 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 CD19P15391 556 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 TKTL1P51854 596 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 SEC13P55735 322 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 GCNT1Q02742 428 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 PDE4CQ08493 712 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms